RNA–Protein interactions for RNA: ENST00000563405.1

NUP93-204, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 477 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-204ENST00000563405 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
NUP93-204ENST00000563405 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
NUP93-204ENST00000563405 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
NUP93-204ENST00000563405 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
NUP93-204ENST00000563405 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
NUP93-204ENST00000563405 FOXD1Q16676 465 aa12.05□□□□□ -0.48
NUP93-204ENST00000563405 ADRA2BP18089 450 aa11.69□□□□□ -0.54
NUP93-204ENST00000563405 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
NUP93-204ENST00000563405 PIAS4Q8N2W9 510 aaPredicted RBP11.42□□□□□ -0.58
NUP93-204ENST00000563405 MSH5O43196 834 aa11.12□□□□□ -0.63
NUP93-204ENST00000563405 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
NUP93-204ENST00000563405 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
NUP93-204ENST00000563405 KCNA4P22459 653 aa10.75□□□□□ -0.69
NUP93-204ENST00000563405 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
NUP93-204ENST00000563405 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
NUP93-204ENST00000563405 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
NUP93-204ENST00000563405 NPM3O75607 178 aaKnown RBP10.47□□□□□ -0.73
NUP93-204ENST00000563405 DMRT2Q9Y5R5 561 aa10.41□□□□□ -0.74
NUP93-204ENST00000563405 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
NUP93-204ENST00000563405 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
NUP93-204ENST00000563405 HOXD11P31277 338 aaPredicted RBP10.24□□□□□ -0.77
NUP93-204ENST00000563405 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
NUP93-204ENST00000563405 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
NUP93-204ENST00000563405 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
NUP93-204ENST00000563405 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
NUP93-204ENST00000563405 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
NUP93-204ENST00000563405 ZBTB22O15209 634 aa9.85□□□□□ -0.83
NUP93-204ENST00000563405 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
NUP93-204ENST00000563405 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
NUP93-204ENST00000563405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUP93-204ENST00000563405 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
NUP93-204ENST00000563405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.62□□□□□ -0.87
NUP93-204ENST00000563405 HNRNPUL2Q1KMD3 747 aaKnown RBP9.62□□□□□ -0.87
NUP93-204ENST00000563405 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
NUP93-204ENST00000563405 ATXN8OSP0DMR3 200 aa9.56□□□□□ -0.88
NUP93-204ENST00000563405 SAMD1Q6SPF0 538 aaPredicted RBP9.56□□□□□ -0.88
NUP93-204ENST00000563405 APLP2Q06481 763 aa9.5□□□□□ -0.89
NUP93-204ENST00000563405 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
NUP93-204ENST00000563405 C1QBPQ07021 282 aaKnown RBP9.44□□□□□ -0.9
NUP93-204ENST00000563405 ATF5Q9Y2D1 282 aaPredicted RBP9.37□□□□□ -0.91
NUP93-204ENST00000563405 CAPN15O75808 1086 aa9.3□□□□□ -0.92
NUP93-204ENST00000563405 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
NUP93-204ENST00000563405 SPINK5Q9NQ38 1064 aaPredicted RBP9.29□□□□□ -0.92
NUP93-204ENST00000563405 TRHP20396 242 aaPredicted RBP9.28□□□□□ -0.92
NUP93-204ENST00000563405 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
NUP93-204ENST00000563405 POLA2Q14181 598 aa9.16□□□□□ -0.94
NUP93-204ENST00000563405 ABCB7O75027 752 aa9.1□□□□□ -0.95
NUP93-204ENST00000563405 DSG3P32926 999 aa9.08□□□□□ -0.96
NUP93-204ENST00000563405 FBLN2P98095 1184 aa9.07□□□□□ -0.96
NUP93-204ENST00000563405 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
NUP93-204ENST00000563405 FKBP8Q14318 412 aa9.01□□□□□ -0.97
NUP93-204ENST00000563405 MKRN4PQ13434 485 aaPredicted RBP8.97□□□□□ -0.97
NUP93-204ENST00000563405 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
NUP93-204ENST00000563405 OSCARQ8IYS5 282 aa8.8□□□□□ -1
NUP93-204ENST00000563405 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
NUP93-204ENST00000563405 SPDYE6P0CI01 402 aa8.79□□□□□ -1
NUP93-204ENST00000563405 SPDYE2Q495Y8 402 aa8.79□□□□□ -1
NUP93-204ENST00000563405 ZNF692Q9BU19 519 aaPredicted RBP8.79□□□□□ -1
NUP93-204ENST00000563405 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
NUP93-204ENST00000563405 PROM2Q8N271 834 aa8.71□□□□□ -1.02
NUP93-204ENST00000563405 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.02
NUP93-204ENST00000563405 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
NUP93-204ENST00000563405 PABPN1Q86U42 306 aaKnown RBP eCLIP8.66□□□□□ -1.02
NUP93-204ENST00000563405 AKT1S1Q96B36 256 aa8.61□□□□□ -1.03
NUP93-204ENST00000563405 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
NUP93-204ENST00000563405 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
NUP93-204ENST00000563405 SPDYE1Q8NFV5 336 aaPredicted RBP8.52□□□□□ -1.05
NUP93-204ENST00000563405 REM2Q8IYK8 340 aaPredicted RBP8.5□□□□□ -1.05
NUP93-204ENST00000563405 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
NUP93-204ENST00000563405 MIER1Q8N108 512 aa8.46□□□□□ -1.06
NUP93-204ENST00000563405 PLEKHG5O94827 1062 aa8.45□□□□□ -1.06
NUP93-204ENST00000563405 AMER1Q5JTC6 1135 aaPredicted RBP8.45□□□□□ -1.06
NUP93-204ENST00000563405 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
NUP93-204ENST00000563405 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
NUP93-204ENST00000563405 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
NUP93-204ENST00000563405 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
NUP93-204ENST00000563405 PITPNM1O00562 1244 aa8.39□□□□□ -1.07
NUP93-204ENST00000563405 ZBTB47Q9UFB7 747 aaPredicted RBP8.38□□□□□ -1.07
NUP93-204ENST00000563405 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
NUP93-204ENST00000563405 SPOCK2Q92563 424 aa8.34□□□□□ -1.07
NUP93-204ENST00000563405 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
NUP93-204ENST00000563405 CHRDL2Q6WN34 429 aa8.26□□□□□ -1.09
NUP93-204ENST00000563405 NPM1P06748 294 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP93-204ENST00000563405 PRKAR2AP13861 404 aaKnown RBP8.21□□□□□ -1.1
NUP93-204ENST00000563405 FXR2P51116 673 aaKnown RBP eCLIP8.21□□□□□ -1.1
NUP93-204ENST00000563405 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
NUP93-204ENST00000563405 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
NUP93-204ENST00000563405 CIZ1Q9ULV3 898 aaPredicted RBP8.19□□□□□ -1.1
NUP93-204ENST00000563405 NUBP1P53384 320 aa8.17□□□□□ -1.1
NUP93-204ENST00000563405 PKD2Q13563 968 aa8.17□□□□□ -1.1
NUP93-204ENST00000563405 GSE1Q14687 1217 aa8.17□□□□□ -1.1
NUP93-204ENST00000563405 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
NUP93-204ENST00000563405 FARP1Q9Y4F1 1045 aaPredicted RBP8.17□□□□□ -1.1
NUP93-204ENST00000563405 DCAF8Q5TAQ9 597 aa8.16□□□□□ -1.1
NUP93-204ENST00000563405 FAM212AQ96EL1 285 aa8.15□□□□□ -1.1
NUP93-204ENST00000563405 ECM2O94769 699 aaPredicted RBP8.14□□□□□ -1.11
NUP93-204ENST00000563405 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
NUP93-204ENST00000563405 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
NUP93-204ENST00000563405 DCAF8L2P0C7V8 631 aa8.08□□□□□ -1.12
NUP93-204ENST00000563405 PAK3O75914 559 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms