RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
SMG9-206ENST00000597598 ABCC9O60706 1549 aa25.68■■□□□ 1.7
SMG9-206ENST00000597598 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
SMG9-206ENST00000597598 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
SMG9-206ENST00000597598 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
SMG9-206ENST00000597598 NACADO15069 1562 aa23.86■■□□□ 1.41
SMG9-206ENST00000597598 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMG9-206ENST00000597598 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
SMG9-206ENST00000597598 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
SMG9-206ENST00000597598 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
SMG9-206ENST00000597598 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
SMG9-206ENST00000597598 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
SMG9-206ENST00000597598 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
SMG9-206ENST00000597598 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
SMG9-206ENST00000597598 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
SMG9-206ENST00000597598 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
SMG9-206ENST00000597598 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
SMG9-206ENST00000597598 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
SMG9-206ENST00000597598 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
SMG9-206ENST00000597598 CUX2O14529 1486 aa22.48■■□□□ 1.19
SMG9-206ENST00000597598 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
SMG9-206ENST00000597598 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SMG9-206ENST00000597598 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
SMG9-206ENST00000597598 NESP48681 1621 aa21.88■■□□□ 1.09
SMG9-206ENST00000597598 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
SMG9-206ENST00000597598 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
SMG9-206ENST00000597598 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
SMG9-206ENST00000597598 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
SMG9-206ENST00000597598 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
SMG9-206ENST00000597598 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
SMG9-206ENST00000597598 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
SMG9-206ENST00000597598 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
SMG9-206ENST00000597598 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
SMG9-206ENST00000597598 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
SMG9-206ENST00000597598 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
SMG9-206ENST00000597598 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
SMG9-206ENST00000597598 WDR62O43379 1518 aa21.37■■□□□ 1.01
SMG9-206ENST00000597598 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
SMG9-206ENST00000597598 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
SMG9-206ENST00000597598 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
SMG9-206ENST00000597598 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
SMG9-206ENST00000597598 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SMG9-206ENST00000597598 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SMG9-206ENST00000597598 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SMG9-206ENST00000597598 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
SMG9-206ENST00000597598 CFTRP13569 1480 aa20.97■□□□□ 0.95
SMG9-206ENST00000597598 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
SMG9-206ENST00000597598 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
SMG9-206ENST00000597598 WIZO95785 1651 aa20.89■□□□□ 0.94
SMG9-206ENST00000597598 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
SMG9-206ENST00000597598 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
SMG9-206ENST00000597598 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
SMG9-206ENST00000597598 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
SMG9-206ENST00000597598 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
SMG9-206ENST00000597598 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
SMG9-206ENST00000597598 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
SMG9-206ENST00000597598 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
SMG9-206ENST00000597598 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
SMG9-206ENST00000597598 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
SMG9-206ENST00000597598 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
SMG9-206ENST00000597598 CHD1O14646 1710 aa20.56■□□□□ 0.88
SMG9-206ENST00000597598 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
SMG9-206ENST00000597598 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.883e-10■■■■■ 43
SMG9-206ENST00000597598 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
SMG9-206ENST00000597598 FBLN2P98095 1184 aa20.47■□□□□ 0.87
SMG9-206ENST00000597598 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
SMG9-206ENST00000597598 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
SMG9-206ENST00000597598 CLASP1Q7Z460 1538 aa20.39■□□□□ 0.85
SMG9-206ENST00000597598 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
SMG9-206ENST00000597598 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
SMG9-206ENST00000597598 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
SMG9-206ENST00000597598 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
SMG9-206ENST00000597598 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
SMG9-206ENST00000597598 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
SMG9-206ENST00000597598 SOGA1O94964 1423 aa20.25■□□□□ 0.83
SMG9-206ENST00000597598 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
SMG9-206ENST00000597598 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
SMG9-206ENST00000597598 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
SMG9-206ENST00000597598 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
SMG9-206ENST00000597598 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
SMG9-206ENST00000597598 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
SMG9-206ENST00000597598 CUX1P39880 1505 aa19.99■□□□□ 0.79
SMG9-206ENST00000597598 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
SMG9-206ENST00000597598 ILDR1Q86SU0 546 aaPredicted RBP19.94■□□□□ 0.78
SMG9-206ENST00000597598 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
SMG9-206ENST00000597598 KIF13AQ9H1H9 1805 aa19.92■□□□□ 0.78
SMG9-206ENST00000597598 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
SMG9-206ENST00000597598 NUP160Q12769 1436 aa19.89■□□□□ 0.77
SMG9-206ENST00000597598 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
SMG9-206ENST00000597598 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
SMG9-206ENST00000597598 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
SMG9-206ENST00000597598 KDM4FA0A1W2PPD8 638 aa19.86■□□□□ 0.77
SMG9-206ENST00000597598 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
SMG9-206ENST00000597598 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
SMG9-206ENST00000597598 FAM69CQ0P6D2 419 aa19.77■□□□□ 0.76
SMG9-206ENST00000597598 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
SMG9-206ENST00000597598 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
SMG9-206ENST00000597598 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
SMG9-206ENST00000597598 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
SMG9-206ENST00000597598 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms