RNA–Protein interactions for RNA: ENST00000478152.1

CAB39-204, Transcript of calcium binding protein 39, humanhuman

TSL 2

Gene CAB39, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-204ENST00000478152 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
CAB39-204ENST00000478152 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
CAB39-204ENST00000478152 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
CAB39-204ENST00000478152 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
CAB39-204ENST00000478152 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
CAB39-204ENST00000478152 FOXD1Q16676 465 aa21.43■■□□□ 1.02
CAB39-204ENST00000478152 PPP6R1Q9UPN7 881 aa20.98■□□□□ 0.95
CAB39-204ENST00000478152 ADRA2BP18089 450 aa20.96■□□□□ 0.95
CAB39-204ENST00000478152 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
CAB39-204ENST00000478152 KCNA4P22459 653 aa19.62■□□□□ 0.73
CAB39-204ENST00000478152 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
CAB39-204ENST00000478152 MSH5O43196 834 aa19.51■□□□□ 0.71
CAB39-204ENST00000478152 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
CAB39-204ENST00000478152 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
CAB39-204ENST00000478152 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
CAB39-204ENST00000478152 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
CAB39-204ENST00000478152 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
CAB39-204ENST00000478152 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
CAB39-204ENST00000478152 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
CAB39-204ENST00000478152 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
CAB39-204ENST00000478152 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
CAB39-204ENST00000478152 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
CAB39-204ENST00000478152 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
CAB39-204ENST00000478152 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
CAB39-204ENST00000478152 ZBTB22O15209 634 aa18.1■□□□□ 0.49
CAB39-204ENST00000478152 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
CAB39-204ENST00000478152 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
CAB39-204ENST00000478152 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
CAB39-204ENST00000478152 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
CAB39-204ENST00000478152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
CAB39-204ENST00000478152 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CAB39-204ENST00000478152 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
CAB39-204ENST00000478152 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
CAB39-204ENST00000478152 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
CAB39-204ENST00000478152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
CAB39-204ENST00000478152 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
CAB39-204ENST00000478152 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
CAB39-204ENST00000478152 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
CAB39-204ENST00000478152 APLP2Q06481 763 aa16.71■□□□□ 0.27
CAB39-204ENST00000478152 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
CAB39-204ENST00000478152 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
CAB39-204ENST00000478152 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
CAB39-204ENST00000478152 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
CAB39-204ENST00000478152 CAPN15O75808 1086 aa16.49■□□□□ 0.23
CAB39-204ENST00000478152 FKBP8Q14318 412 aa16.47■□□□□ 0.23
CAB39-204ENST00000478152 POLA2Q14181 598 aa16.36■□□□□ 0.21
CAB39-204ENST00000478152 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
CAB39-204ENST00000478152 ABCB7O75027 752 aa16.25■□□□□ 0.19
CAB39-204ENST00000478152 DSG3P32926 999 aa16.15■□□□□ 0.18
CAB39-204ENST00000478152 FBLN2P98095 1184 aa16.15■□□□□ 0.18
CAB39-204ENST00000478152 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
CAB39-204ENST00000478152 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
CAB39-204ENST00000478152 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
CAB39-204ENST00000478152 PROM2Q8N271 834 aa15.88■□□□□ 0.13
CAB39-204ENST00000478152 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
CAB39-204ENST00000478152 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
CAB39-204ENST00000478152 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
CAB39-204ENST00000478152 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
CAB39-204ENST00000478152 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
CAB39-204ENST00000478152 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
CAB39-204ENST00000478152 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
CAB39-204ENST00000478152 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
CAB39-204ENST00000478152 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
CAB39-204ENST00000478152 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
CAB39-204ENST00000478152 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
CAB39-204ENST00000478152 IFNLR1Q8IU57 520 aaPredicted RBP15.41■□□□□ 0.06
CAB39-204ENST00000478152 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
CAB39-204ENST00000478152 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
CAB39-204ENST00000478152 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
CAB39-204ENST00000478152 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
CAB39-204ENST00000478152 MIER1Q8N108 512 aa15.17■□□□□ 0.02
CAB39-204ENST00000478152 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
CAB39-204ENST00000478152 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
CAB39-204ENST00000478152 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
CAB39-204ENST00000478152 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
CAB39-204ENST00000478152 PKD2Q13563 968 aa15.05■□□□□ -0
CAB39-204ENST00000478152 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
CAB39-204ENST00000478152 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
CAB39-204ENST00000478152 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
CAB39-204ENST00000478152 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
CAB39-204ENST00000478152 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
CAB39-204ENST00000478152 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CAB39-204ENST00000478152 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
CAB39-204ENST00000478152 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
CAB39-204ENST00000478152 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
CAB39-204ENST00000478152 NUBP1P53384 320 aa14.79□□□□□ -0.04
CAB39-204ENST00000478152 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
CAB39-204ENST00000478152 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
CAB39-204ENST00000478152 RGL2O15211 777 aa14.72□□□□□ -0.05
CAB39-204ENST00000478152 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
CAB39-204ENST00000478152 GSE1Q14687 1217 aa14.65□□□□□ -0.06
CAB39-204ENST00000478152 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
CAB39-204ENST00000478152 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
CAB39-204ENST00000478152 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
CAB39-204ENST00000478152 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
CAB39-204ENST00000478152 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
CAB39-204ENST00000478152 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
CAB39-204ENST00000478152 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
CAB39-204ENST00000478152 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
CAB39-204ENST00000478152 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms