RNA–Protein interactions for RNA: ENST00000526051.1

GSDMD-205, Transcript of gasdermin D, humanhuman

TSL 3

Gene GSDMD, Length 700 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-205ENST00000526051 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
GSDMD-205ENST00000526051 CCDC180Q9P1Z9 1646 aa35.02■■■■□ 3.2
GSDMD-205ENST00000526051 ABCC9O60706 1549 aa34.5■■■■□ 3.11
GSDMD-205ENST00000526051 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
GSDMD-205ENST00000526051 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
GSDMD-205ENST00000526051 NACADO15069 1562 aa32.95■■■□□ 2.86
GSDMD-205ENST00000526051 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
GSDMD-205ENST00000526051 MYO15BQ96JP2 1530 aa32.63■■■□□ 2.81
GSDMD-205ENST00000526051 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
GSDMD-205ENST00000526051 UNC13AQ9UPW8 1703 aa32.39■■■□□ 2.78
GSDMD-205ENST00000526051 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
GSDMD-205ENST00000526051 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
GSDMD-205ENST00000526051 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
GSDMD-205ENST00000526051 DNAJC5BQ9UF47 199 aa31.96■■■□□ 2.71
GSDMD-205ENST00000526051 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
GSDMD-205ENST00000526051 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
GSDMD-205ENST00000526051 CC2D2AQ9P2K1 1620 aa31.23■■■□□ 2.59
GSDMD-205ENST00000526051 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
GSDMD-205ENST00000526051 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
GSDMD-205ENST00000526051 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
GSDMD-205ENST00000526051 ATAD2BQ9ULI0 1458 aa30.39■■■□□ 2.46
GSDMD-205ENST00000526051 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
GSDMD-205ENST00000526051 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
GSDMD-205ENST00000526051 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
GSDMD-205ENST00000526051 HMGXB3Q12766 1538 aa30.24■■■□□ 2.43
GSDMD-205ENST00000526051 PEG3Q9GZU2 1588 aa30.16■■■□□ 2.42
GSDMD-205ENST00000526051 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
GSDMD-205ENST00000526051 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
GSDMD-205ENST00000526051 WIZO95785 1651 aa29.99■■■□□ 2.39
GSDMD-205ENST00000526051 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
GSDMD-205ENST00000526051 NESP48681 1621 aa29.8■■■□□ 2.36
GSDMD-205ENST00000526051 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
GSDMD-205ENST00000526051 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
GSDMD-205ENST00000526051 CUX2O14529 1486 aa29.61■■■□□ 2.33
GSDMD-205ENST00000526051 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
GSDMD-205ENST00000526051 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
GSDMD-205ENST00000526051 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
GSDMD-205ENST00000526051 THOC2Q8NI27 1593 aaKnown RBP29.45■■■□□ 2.31
GSDMD-205ENST00000526051 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.3
GSDMD-205ENST00000526051 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
GSDMD-205ENST00000526051 CFTRP13569 1480 aa29.28■■■□□ 2.28
GSDMD-205ENST00000526051 FANCD2Q9BXW9 1451 aa29.19■■■□□ 2.26
GSDMD-205ENST00000526051 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
GSDMD-205ENST00000526051 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
GSDMD-205ENST00000526051 WDR62O43379 1518 aa29.12■■■□□ 2.25
GSDMD-205ENST00000526051 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
GSDMD-205ENST00000526051 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
GSDMD-205ENST00000526051 URB2Q14146 1524 aaKnown RBP28.91■■■□□ 2.22
GSDMD-205ENST00000526051 TOPBP1Q92547 1522 aa28.7■■■□□ 2.19
GSDMD-205ENST00000526051 ABCC8Q09428 1581 aa28.65■■■□□ 2.18
GSDMD-205ENST00000526051 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
GSDMD-205ENST00000526051 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
GSDMD-205ENST00000526051 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
GSDMD-205ENST00000526051 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
GSDMD-205ENST00000526051 CUX1P39880 1505 aa28.42■■■□□ 2.14
GSDMD-205ENST00000526051 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
GSDMD-205ENST00000526051 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
GSDMD-205ENST00000526051 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
GSDMD-205ENST00000526051 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
GSDMD-205ENST00000526051 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
GSDMD-205ENST00000526051 SOGA1O94964 1423 aa28.35■■■□□ 2.13
GSDMD-205ENST00000526051 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.12
GSDMD-205ENST00000526051 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
GSDMD-205ENST00000526051 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
GSDMD-205ENST00000526051 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
GSDMD-205ENST00000526051 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
GSDMD-205ENST00000526051 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
GSDMD-205ENST00000526051 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
GSDMD-205ENST00000526051 CHD1O14646 1710 aa28.11■■■□□ 2.09
GSDMD-205ENST00000526051 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
GSDMD-205ENST00000526051 FBLN2P98095 1184 aa28.09■■■□□ 2.09
GSDMD-205ENST00000526051 ABCA10Q8WWZ4 1543 aa28.03■■■□□ 2.08
GSDMD-205ENST00000526051 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
GSDMD-205ENST00000526051 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
GSDMD-205ENST00000526051 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
GSDMD-205ENST00000526051 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
GSDMD-205ENST00000526051 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
GSDMD-205ENST00000526051 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
GSDMD-205ENST00000526051 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
GSDMD-205ENST00000526051 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
GSDMD-205ENST00000526051 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
GSDMD-205ENST00000526051 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
GSDMD-205ENST00000526051 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
GSDMD-205ENST00000526051 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
GSDMD-205ENST00000526051 CLASP1Q7Z460 1538 aa27.75■■■□□ 2.03
GSDMD-205ENST00000526051 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
GSDMD-205ENST00000526051 ERICH3Q5RHP9 1530 aa27.69■■■□□ 2.02
GSDMD-205ENST00000526051 GRIN2AQ12879 1464 aa27.65■■■□□ 2.02
GSDMD-205ENST00000526051 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
GSDMD-205ENST00000526051 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
GSDMD-205ENST00000526051 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
GSDMD-205ENST00000526051 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
GSDMD-205ENST00000526051 CEP170Q5SW79 1584 aa27.54■■■□□ 2
GSDMD-205ENST00000526051 NUP160Q12769 1436 aa27.5■■□□□ 1.99
GSDMD-205ENST00000526051 IGF1RP08069 1367 aa27.5■■□□□ 1.99
GSDMD-205ENST00000526051 CUL7Q14999 1698 aa27.43■■□□□ 1.98
GSDMD-205ENST00000526051 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
GSDMD-205ENST00000526051 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
GSDMD-205ENST00000526051 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
GSDMD-205ENST00000526051 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms