RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
RAB11FIP4-210ENST00000585058 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
RAB11FIP4-210ENST00000585058 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
RAB11FIP4-210ENST00000585058 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
RAB11FIP4-210ENST00000585058 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
RAB11FIP4-210ENST00000585058 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
RAB11FIP4-210ENST00000585058 APLP2Q06481 763 aa20.79■□□□□ 0.92
RAB11FIP4-210ENST00000585058 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
RAB11FIP4-210ENST00000585058 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
RAB11FIP4-210ENST00000585058 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
RAB11FIP4-210ENST00000585058 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
RAB11FIP4-210ENST00000585058 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
RAB11FIP4-210ENST00000585058 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
RAB11FIP4-210ENST00000585058 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
RAB11FIP4-210ENST00000585058 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.8
RAB11FIP4-210ENST00000585058 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
RAB11FIP4-210ENST00000585058 NEFLP07196 543 aa19.96■□□□□ 0.79
RAB11FIP4-210ENST00000585058 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
RAB11FIP4-210ENST00000585058 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
RAB11FIP4-210ENST00000585058 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
RAB11FIP4-210ENST00000585058 MYT1Q01538 1121 aa19.69■□□□□ 0.74
RAB11FIP4-210ENST00000585058 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP4-210ENST00000585058 DAXXQ9UER7 740 aaPredicted RBP19.52■□□□□ 0.72
RAB11FIP4-210ENST00000585058 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
RAB11FIP4-210ENST00000585058 ITGAEP38570 1179 aa19.38■□□□□ 0.69
RAB11FIP4-210ENST00000585058 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
RAB11FIP4-210ENST00000585058 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
RAB11FIP4-210ENST00000585058 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
RAB11FIP4-210ENST00000585058 HRCP23327 699 aa19.27■□□□□ 0.68
RAB11FIP4-210ENST00000585058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
RAB11FIP4-210ENST00000585058 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
RAB11FIP4-210ENST00000585058 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
RAB11FIP4-210ENST00000585058 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
RAB11FIP4-210ENST00000585058 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
RAB11FIP4-210ENST00000585058 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
RAB11FIP4-210ENST00000585058 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
RAB11FIP4-210ENST00000585058 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
RAB11FIP4-210ENST00000585058 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
RAB11FIP4-210ENST00000585058 BCANQ96GW7 911 aa18.77■□□□□ 0.6
RAB11FIP4-210ENST00000585058 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
RAB11FIP4-210ENST00000585058 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
RAB11FIP4-210ENST00000585058 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
RAB11FIP4-210ENST00000585058 ZNF326Q5BKZ1 582 aaKnown RBP18.6■□□□□ 0.57
RAB11FIP4-210ENST00000585058 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
RAB11FIP4-210ENST00000585058 GTF3C3Q9Y5Q9 886 aa18.6■□□□□ 0.57
RAB11FIP4-210ENST00000585058 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.57
RAB11FIP4-210ENST00000585058 BCL11AQ9H165 835 aa18.57■□□□□ 0.56
RAB11FIP4-210ENST00000585058 ANP32CO43423 234 aa18.56■□□□□ 0.56
RAB11FIP4-210ENST00000585058 ABCC9O60706 1549 aa18.52■□□□□ 0.55
RAB11FIP4-210ENST00000585058 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
RAB11FIP4-210ENST00000585058 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
RAB11FIP4-210ENST00000585058 NEFMP07197 916 aa18.31■□□□□ 0.52
RAB11FIP4-210ENST00000585058 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
RAB11FIP4-210ENST00000585058 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
RAB11FIP4-210ENST00000585058 FBLN2P98095 1184 aa18.26■□□□□ 0.51
RAB11FIP4-210ENST00000585058 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB11FIP4-210ENST00000585058 ARID3CA6NKF2 412 aa18.2■□□□□ 0.5
RAB11FIP4-210ENST00000585058 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
RAB11FIP4-210ENST00000585058 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
RAB11FIP4-210ENST00000585058 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
RAB11FIP4-210ENST00000585058 ANP32BQ92688 251 aaKnown RBP18.13■□□□□ 0.49
RAB11FIP4-210ENST00000585058 HSP90AA1P07900 732 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP4-210ENST00000585058 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
RAB11FIP4-210ENST00000585058 FKBP8Q14318 412 aa18.08■□□□□ 0.49
RAB11FIP4-210ENST00000585058 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.48
RAB11FIP4-210ENST00000585058 UPF2Q9HAU5 1272 aaKnown RBP18.01■□□□□ 0.47
RAB11FIP4-210ENST00000585058 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
RAB11FIP4-210ENST00000585058 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
RAB11FIP4-210ENST00000585058 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
RAB11FIP4-210ENST00000585058 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
RAB11FIP4-210ENST00000585058 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
RAB11FIP4-210ENST00000585058 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
RAB11FIP4-210ENST00000585058 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
RAB11FIP4-210ENST00000585058 ARXQ96QS3 562 aa17.91■□□□□ 0.46
RAB11FIP4-210ENST00000585058 NBR1Q14596 966 aa17.91■□□□□ 0.46
RAB11FIP4-210ENST00000585058 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
RAB11FIP4-210ENST00000585058 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
RAB11FIP4-210ENST00000585058 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.46
RAB11FIP4-210ENST00000585058 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.46
RAB11FIP4-210ENST00000585058 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
RAB11FIP4-210ENST00000585058 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
RAB11FIP4-210ENST00000585058 GLIPR1L2Q4G1C9 344 aa17.85■□□□□ 0.45
RAB11FIP4-210ENST00000585058 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.81■□□□□ 0.44
RAB11FIP4-210ENST00000585058 TMC1Q8TDI8 760 aa17.8■□□□□ 0.44
RAB11FIP4-210ENST00000585058 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
RAB11FIP4-210ENST00000585058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.436e-6■□□□□ 8.3
RAB11FIP4-210ENST00000585058 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
RAB11FIP4-210ENST00000585058 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
RAB11FIP4-210ENST00000585058 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
RAB11FIP4-210ENST00000585058 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
RAB11FIP4-210ENST00000585058 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
RAB11FIP4-210ENST00000585058 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
RAB11FIP4-210ENST00000585058 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
RAB11FIP4-210ENST00000585058 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
RAB11FIP4-210ENST00000585058 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
RAB11FIP4-210ENST00000585058 A0A0G2JS52 829 aa17.6■□□□□ 0.41
RAB11FIP4-210ENST00000585058 MIER1Q8N108 512 aa17.55■□□□□ 0.4
RAB11FIP4-210ENST00000585058 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
RAB11FIP4-210ENST00000585058 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
RAB11FIP4-210ENST00000585058 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms