RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
CALD1-214ENST00000466704 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
CALD1-214ENST00000466704 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
CALD1-214ENST00000466704 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
CALD1-214ENST00000466704 FOXD1Q16676 465 aa17.53■□□□□ 0.4
CALD1-214ENST00000466704 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
CALD1-214ENST00000466704 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
CALD1-214ENST00000466704 MSH5O43196 834 aa16.55■□□□□ 0.24
CALD1-214ENST00000466704 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CALD1-214ENST00000466704 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
CALD1-214ENST00000466704 ADRA2BP18089 450 aa16.08■□□□□ 0.16
CALD1-214ENST00000466704 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
CALD1-214ENST00000466704 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
CALD1-214ENST00000466704 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
CALD1-214ENST00000466704 SCAF1Q9H7N4 1312 aaKnown RBP14.77□□□□□ -0.04
CALD1-214ENST00000466704 KCNA4P22459 653 aa14.56□□□□□ -0.08
CALD1-214ENST00000466704 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
CALD1-214ENST00000466704 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
CALD1-214ENST00000466704 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
CALD1-214ENST00000466704 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
CALD1-214ENST00000466704 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
CALD1-214ENST00000466704 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
CALD1-214ENST00000466704 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
CALD1-214ENST00000466704 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
CALD1-214ENST00000466704 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
CALD1-214ENST00000466704 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
CALD1-214ENST00000466704 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
CALD1-214ENST00000466704 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
CALD1-214ENST00000466704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.257e-7■■■□□ 16.2
CALD1-214ENST00000466704 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
CALD1-214ENST00000466704 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CALD1-214ENST00000466704 ZBTB22O15209 634 aa13.36□□□□□ -0.27
CALD1-214ENST00000466704 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
CALD1-214ENST00000466704 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
CALD1-214ENST00000466704 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
CALD1-214ENST00000466704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
CALD1-214ENST00000466704 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
CALD1-214ENST00000466704 DSG3P32926 999 aa13.08□□□□□ -0.32
CALD1-214ENST00000466704 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
CALD1-214ENST00000466704 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
CALD1-214ENST00000466704 CAPN15O75808 1086 aa13.02□□□□□ -0.33
CALD1-214ENST00000466704 APLP2Q06481 763 aa12.99□□□□□ -0.33
CALD1-214ENST00000466704 POTEHQ6S545 545 aa12.98□□□□□ -0.33
CALD1-214ENST00000466704 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
CALD1-214ENST00000466704 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
CALD1-214ENST00000466704 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
CALD1-214ENST00000466704 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
CALD1-214ENST00000466704 ABCB7O75027 752 aa12.69□□□□□ -0.38
CALD1-214ENST00000466704 POLA2Q14181 598 aa12.56□□□□□ -0.4
CALD1-214ENST00000466704 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
CALD1-214ENST00000466704 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
CALD1-214ENST00000466704 FBLN2P98095 1184 aa12.36□□□□□ -0.43
CALD1-214ENST00000466704 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
CALD1-214ENST00000466704 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
CALD1-214ENST00000466704 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
CALD1-214ENST00000466704 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
CALD1-214ENST00000466704 FKBP8Q14318 412 aa12.11□□□□□ -0.47
CALD1-214ENST00000466704 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
CALD1-214ENST00000466704 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
CALD1-214ENST00000466704 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
CALD1-214ENST00000466704 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
CALD1-214ENST00000466704 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
CALD1-214ENST00000466704 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
CALD1-214ENST00000466704 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
CALD1-214ENST00000466704 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
CALD1-214ENST00000466704 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
CALD1-214ENST00000466704 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
CALD1-214ENST00000466704 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 30.9
CALD1-214ENST00000466704 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
CALD1-214ENST00000466704 HAX1O00165 279 aa11.79□□□□□ -0.52
CALD1-214ENST00000466704 PROM2Q8N271 834 aa11.79□□□□□ -0.52
CALD1-214ENST00000466704 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
CALD1-214ENST00000466704 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
CALD1-214ENST00000466704 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
CALD1-214ENST00000466704 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
CALD1-214ENST00000466704 EVX2Q03828 476 aa11.64□□□□□ -0.55
CALD1-214ENST00000466704 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
CALD1-214ENST00000466704 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
CALD1-214ENST00000466704 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
CALD1-214ENST00000466704 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
CALD1-214ENST00000466704 MIER1Q8N108 512 aa11.46□□□□□ -0.57
CALD1-214ENST00000466704 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
CALD1-214ENST00000466704 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
CALD1-214ENST00000466704 GABBR2O75899 941 aa11.38□□□□□ -0.59
CALD1-214ENST00000466704 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CALD1-214ENST00000466704 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
CALD1-214ENST00000466704 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
CALD1-214ENST00000466704 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
CALD1-214ENST00000466704 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
CALD1-214ENST00000466704 LHX8Q68G74 356 aa11.26□□□□□ -0.61
CALD1-214ENST00000466704 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
CALD1-214ENST00000466704 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
CALD1-214ENST00000466704 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
CALD1-214ENST00000466704 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
CALD1-214ENST00000466704 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
CALD1-214ENST00000466704 CLCN6P51797 869 aa11.16□□□□□ -0.62
CALD1-214ENST00000466704 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
CALD1-214ENST00000466704 NUBP1P53384 320 aa11.1□□□□□ -0.63
CALD1-214ENST00000466704 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
CALD1-214ENST00000466704 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms