Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH23Q9H251 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH23Q9H251 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH23Q9H251 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH23Q9H251 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDH23Q9H251 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH23Q9H251 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH23Q9H251 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDH23Q9H251 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.78■■□□□ 1.08
CDH23Q9H251 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CDH23Q9H251 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH23Q9H251 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH23Q9H251 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDH23Q9H251 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH23Q9H251 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH23Q9H251 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH23Q9H251 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH23Q9H251 AL450487.1-201ENST00000426799 995 ntBASIC21.78■■□□□ 1.08
CDH23Q9H251 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH23Q9H251 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDH23Q9H251 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH23Q9H251 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH23Q9H251 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH23Q9H251 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH23Q9H251 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.77■■□□□ 1.08
CDH23Q9H251 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH23Q9H251 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 FITM1-202ENST00000559294 800 ntBASIC21.76■■□□□ 1.07
CDH23Q9H251 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH23Q9H251 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH23Q9H251 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH23Q9H251 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH23Q9H251 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH23Q9H251 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH23Q9H251 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.75■■□□□ 1.07
CDH23Q9H251 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH23Q9H251 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH23Q9H251 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH23Q9H251 BX664615.1-201ENST00000443558 458 ntBASIC21.75■■□□□ 1.07
CDH23Q9H251 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH23Q9H251 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDH23Q9H251 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH23Q9H251 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH23Q9H251 AL031133.1-201ENST00000406807 723 ntBASIC21.74■■□□□ 1.07
CDH23Q9H251 AC245052.3-201ENST00000450182 901 ntBASIC21.74■■□□□ 1.07
CDH23Q9H251 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.74■■□□□ 1.07
CDH23Q9H251 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH23Q9H251 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH23Q9H251 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.74■■□□□ 1.07
CDH23Q9H251 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH23Q9H251 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH23Q9H251 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDH23Q9H251 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CDH23Q9H251 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH23Q9H251 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH23Q9H251 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH23Q9H251 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
CDH23Q9H251 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.73■■□□□ 1.07
CDH23Q9H251 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH23Q9H251 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH23Q9H251 AC080038.3-201ENST00000623346 1952 ntBASIC21.73■■□□□ 1.07
CDH23Q9H251 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms