Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.24■□□□□ 0.832e-6■■■□□ 16.3
SND1Q7KZF4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.79■□□□□ 0.282e-6■■■□□ 16.3
SND1Q7KZF4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-6■■■□□ 16.3
SND1Q7KZF4 ACTL6A-206ENST00000467615 964 ntTSL 57.96□□□□□ -1.142e-6■■■□□ 16.3
SND1Q7KZF4 ACTL6A-211ENST00000487978 916 ntTSL 55.82□□□□□ -1.482e-6■■■□□ 16.3
SND1Q7KZF4 AGRN-205ENST00000469403 899 ntTSL 327.52■■■□□ 21e-7■■■□□ 16.3
SND1Q7KZF4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.233e-6■■■□□ 16.3
SND1Q7KZF4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.013e-6■■■□□ 16.3
SND1Q7KZF4 MYL12A-204ENST00000578038 463 ntTSL 36.34□□□□□ -1.392e-12■■■□□ 16.3
SND1Q7KZF4 MOGS-203ENST00000414701 520 ntTSL 315.18■□□□□ 0.022e-7■■■□□ 16.3
SND1Q7KZF4 SLC38A5-201ENST00000413668 741 ntTSL 212.91□□□□□ -0.345e-12■■■□□ 16.3
SND1Q7KZF4 CHID1-212ENST00000528426 991 ntTSL 529.67■■■□□ 2.346e-7■■■□□ 16.3
SND1Q7KZF4 CHID1-217ENST00000530939 571 ntTSL 427.29■■□□□ 1.962e-6■■■□□ 16.3
SND1Q7KZF4 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.434e-11■■■□□ 16.3
SND1Q7KZF4 HP-203ENST00000357763 1482 ntTSL 5 BASIC12.08□□□□□ -0.474e-11■■■□□ 16.3
SND1Q7KZF4 HP-209ENST00000565574 1187 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.634e-11■■■□□ 16.3
SND1Q7KZF4 HP-202ENST00000355906 1443 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.644e-11■■■□□ 16.3
SND1Q7KZF4 HP-201ENST00000228226 960 ntTSL 5 BASIC10.67□□□□□ -0.74e-11■■■□□ 16.3
SND1Q7KZF4 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC10.62□□□□□ -0.714e-11■■■□□ 16.3
SND1Q7KZF4 HP-213ENST00000567612 1232 ntTSL 510.46□□□□□ -0.734e-11■■■□□ 16.3
SND1Q7KZF4 HP-212ENST00000567185 1251 ntTSL 510.21□□□□□ -0.774e-11■■■□□ 16.3
SND1Q7KZF4 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.774e-11■■■□□ 16.3
SND1Q7KZF4 HP-207ENST00000562526 685 ntTSL 3 BASIC9.11□□□□□ -0.954e-11■■■□□ 16.3
SND1Q7KZF4 HP-211ENST00000566821 3024 ntTSL 27.41□□□□□ -1.224e-11■■■□□ 16.3
SND1Q7KZF4 PRKCSH-219ENST00000593101 578 ntTSL 416.2■□□□□ 0.184e-10■■■□□ 16.3
SND1Q7KZF4 PRKCSH-218ENST00000593053 588 ntTSL 513.49□□□□□ -0.254e-10■■■□□ 16.3
SND1Q7KZF4 PRKCSH-206ENST00000587509 545 ntTSL 412.2□□□□□ -0.464e-10■■■□□ 16.3
SND1Q7KZF4 PKM-214ENST00000565143 2301 ntTSL 1 (best)14.05□□□□□ -0.161e-11■■■□□ 16.3
SND1Q7KZF4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.783e-6■■■□□ 16.2
SND1Q7KZF4 ALG2-201ENST00000238477 2966 ntTSL 218.79■□□□□ 0.63e-6■■■□□ 16.2
SND1Q7KZF4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.62□□□□□ -1.193e-6■■■□□ 16.2
SND1Q7KZF4 MOGS-206ENST00000462189 2400 ntTSL 215.23■□□□□ 0.033e-8■■■□□ 16.2
SND1Q7KZF4 FGG-211ENST00000484695 354 ntTSL 23.09□□□□□ -1.912e-39■■■□□ 16.2
SND1Q7KZF4 LAMB2-210ENST00000483057 558 ntTSL 215.71■□□□□ 0.119e-11■■■□□ 16.2
SND1Q7KZF4 LAMB2-204ENST00000464891 732 ntTSL 414.37□□□□□ -0.119e-11■■■□□ 16.2
SND1Q7KZF4 SLC13A5-207ENST00000572727 618 ntTSL 215.26■□□□□ 0.038e-8■■■□□ 16.2
SND1Q7KZF4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.83e-10■■■□□ 16.2
SND1Q7KZF4 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)23.01■■□□□ 1.275e-9■■■□□ 16.2
SND1Q7KZF4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.873e-10■■■□□ 16.2
SND1Q7KZF4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.863e-10■■■□□ 16.2
SND1Q7KZF4 KRT18-206ENST00000549078 2088 ntTSL 520.15■□□□□ 0.823e-10■■■□□ 16.2
SND1Q7KZF4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.5■□□□□ 0.235e-9■■■□□ 16.2
SND1Q7KZF4 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.075e-9■■■□□ 16.2
SND1Q7KZF4 PIGS-214ENST00000584080 584 ntTSL 413.21□□□□□ -0.295e-9■■■□□ 16.2
SND1Q7KZF4 PIGS-201ENST00000268758 2397 ntTSL 212.42□□□□□ -0.425e-9■■■□□ 16.2
SND1Q7KZF4 DGCR2-204ENST00000473832 606 ntTSL 511.01□□□□□ -0.654e-11■■■□□ 16.2
SND1Q7KZF4 COL9A3-213ENST00000489045 838 ntTSL 523.69■■□□□ 1.387e-18■■■□□ 16.2
SND1Q7KZF4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.41■□□□□ 0.542e-7■■■□□ 16.2
SND1Q7KZF4 MT1X-204ENST00000568370 1727 nt16.89■□□□□ 0.291e-9■■■□□ 16.2
SND1Q7KZF4 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.22e-7■■■□□ 16.2
SND1Q7KZF4 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.41□□□□□ -0.261e-9■■■□□ 16.2
SND1Q7KZF4 SLC43A1-205ENST00000529452 821 ntTSL 313.19□□□□□ -0.32e-7■■■□□ 16.2
SND1Q7KZF4 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.891e-9■■■□□ 16.2
SND1Q7KZF4 MT1X-203ENST00000564974 549 ntTSL 1 (best)9.16□□□□□ -0.941e-9■■■□□ 16.2
SND1Q7KZF4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.37□□□□□ -1.072e-7■■■□□ 16.2
SND1Q7KZF4 SARS-204ENST00000471705 851 ntTSL 27.58□□□□□ -1.22e-7■■■□□ 16.2
SND1Q7KZF4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.232e-7■■■□□ 16.2
SND1Q7KZF4 TMEM135-205ENST00000528861 1146 ntTSL 37.03□□□□□ -1.282e-7■■■□□ 16.2
SND1Q7KZF4 TMEM135-207ENST00000531643 1319 ntTSL 1 (best)6.63□□□□□ -1.352e-7■■■□□ 16.2
SND1Q7KZF4 TMEM39A-206ENST00000473684 3043 ntTSL 56.54□□□□□ -1.362e-7■■■□□ 16.2
SND1Q7KZF4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.75□□□□□ -1.492e-7■■■□□ 16.2
SND1Q7KZF4 HACD3-203ENST00000561763 483 ntTSL 310.76□□□□□ -0.692e-10■■■□□ 16.2
SND1Q7KZF4 DDB1-215ENST00000539712 1020 ntTSL 217.23■□□□□ 0.351e-6■■■□□ 16.2
SND1Q7KZF4 GTF3C1-211ENST00000569653 897 ntTSL 214.21□□□□□ -0.131e-7■■■□□ 16.2
SND1Q7KZF4 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.441e-7■■■□□ 16.2
SND1Q7KZF4 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.571e-7■■■□□ 16.2
SND1Q7KZF4 CLN3-211ENST00000564091 790 ntTSL 517.41■□□□□ 0.381e-8■■■□□ 16.2
SND1Q7KZF4 AC138894.1-212ENST00000637745 879 ntTSL 514.47□□□□□ -0.091e-8■■■□□ 16.2
SND1Q7KZF4 MCAM-214ENST00000530144 909 ntTSL 321.61■■□□□ 1.058e-10■■■□□ 16.2
SND1Q7KZF4 MCAM-203ENST00000525555 567 ntTSL 415.65■□□□□ 0.18e-10■■■□□ 16.2
SND1Q7KZF4 MCAM-217ENST00000534522 569 ntTSL 414.75□□□□□ -0.058e-10■■■□□ 16.2
SND1Q7KZF4 NPC1-211ENST00000591075 809 ntTSL 49.24□□□□□ -0.934e-11■■■□□ 16.2
SND1Q7KZF4 PCOLCE-208ENST00000487172 686 ntTSL 220.14■□□□□ 0.818e-8■■■□□ 16.2
SND1Q7KZF4 PCOLCE-206ENST00000482863 545 ntTSL 416.14■□□□□ 0.178e-8■■■□□ 16.2
SND1Q7KZF4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.815e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.6■■□□□ 1.535e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.535e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.115e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-210ENST00000464987 2205 ntTSL 520.41■□□□□ 0.865e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.835e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.775e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-212ENST00000494815 2187 ntTSL 219.8■□□□□ 0.765e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.02■□□□□ 0.485e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.415e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-211ENST00000468468 2777 ntTSL 217.45■□□□□ 0.385e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.2■□□□□ 0.345e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.4■□□□□ 0.225e-7■■■□□ 16.2
SND1Q7KZF4 TSPAN4-220ENST00000532375 518 ntTSL 514.39□□□□□ -0.115e-7■■■□□ 16.2
SND1Q7KZF4 CR1L-204ENST00000530905 930 ntTSL 521.91■■□□□ 1.13e-6■■■□□ 16.1
SND1Q7KZF4 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.493e-6■■■□□ 16.1
SND1Q7KZF4 CR1L-205ENST00000531844 663 ntTSL 28.75□□□□□ -1.013e-6■■■□□ 16.1
SND1Q7KZF4 CR1L-201ENST00000294997 1587 ntTSL 1 (best)7.5□□□□□ -1.213e-6■■■□□ 16.1
SND1Q7KZF4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.24■■□□□ 1.473e-8■■■□□ 16.1
SND1Q7KZF4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.133e-8■■■□□ 16.1
SND1Q7KZF4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.73e-8■■■□□ 16.1
SND1Q7KZF4 DDB1-225ENST00000545930 1278 ntTSL 210.14□□□□□ -0.791e-6■■■□□ 16.1
SND1Q7KZF4 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.281e-7■■■□□ 16.1
SND1Q7KZF4 HAMP-202ENST00000593580 2624 nt12.91□□□□□ -0.341e-7■■■□□ 16.1
SND1Q7KZF4 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.421e-7■■■□□ 16.1
SND1Q7KZF4 SPP1-206ENST00000508002 568 ntTSL 1 (best)5.26□□□□□ -1.571e-22■■■□□ 16.1
Retrieved 100 of 13,567 protein–RNA pairs in 187.2 ms