RNA–Protein interactions for RNA: ENST00000487978.5

ACTL6A-211, Transcript of actin like 6A, humanhuman

TSL 5

Gene ACTL6A, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-211ENST00000487978 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
ACTL6A-211ENST00000487978 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
ACTL6A-211ENST00000487978 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
ACTL6A-211ENST00000487978 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
ACTL6A-211ENST00000487978 SENP3Q9H4L4 574 aaPredicted RBP14.86□□□□□ -0.03
ACTL6A-211ENST00000487978 ABCC9O60706 1549 aa14.62□□□□□ -0.07
ACTL6A-211ENST00000487978 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
ACTL6A-211ENST00000487978 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
ACTL6A-211ENST00000487978 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
ACTL6A-211ENST00000487978 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
ACTL6A-211ENST00000487978 FOXD1Q16676 465 aa13.85□□□□□ -0.19
ACTL6A-211ENST00000487978 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
ACTL6A-211ENST00000487978 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
ACTL6A-211ENST00000487978 NACADO15069 1562 aa13.44□□□□□ -0.26
ACTL6A-211ENST00000487978 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
ACTL6A-211ENST00000487978 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
ACTL6A-211ENST00000487978 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
ACTL6A-211ENST00000487978 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
ACTL6A-211ENST00000487978 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
ACTL6A-211ENST00000487978 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
ACTL6A-211ENST00000487978 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
ACTL6A-211ENST00000487978 MSH5O43196 834 aa13.18□□□□□ -0.3
ACTL6A-211ENST00000487978 ADRA2BP18089 450 aa13.17□□□□□ -0.3
ACTL6A-211ENST00000487978 CUX2O14529 1486 aa13.1□□□□□ -0.31
ACTL6A-211ENST00000487978 MYO15BQ96JP2 1530 aa13.09□□□□□ -0.31
ACTL6A-211ENST00000487978 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
ACTL6A-211ENST00000487978 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
ACTL6A-211ENST00000487978 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
ACTL6A-211ENST00000487978 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
ACTL6A-211ENST00000487978 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
ACTL6A-211ENST00000487978 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
ACTL6A-211ENST00000487978 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
ACTL6A-211ENST00000487978 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
ACTL6A-211ENST00000487978 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
ACTL6A-211ENST00000487978 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
ACTL6A-211ENST00000487978 NESP48681 1621 aa12.33□□□□□ -0.43
ACTL6A-211ENST00000487978 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
ACTL6A-211ENST00000487978 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
ACTL6A-211ENST00000487978 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
ACTL6A-211ENST00000487978 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
ACTL6A-211ENST00000487978 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.46
ACTL6A-211ENST00000487978 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.46
ACTL6A-211ENST00000487978 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.46
ACTL6A-211ENST00000487978 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
ACTL6A-211ENST00000487978 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
ACTL6A-211ENST00000487978 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
ACTL6A-211ENST00000487978 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
ACTL6A-211ENST00000487978 WDR62O43379 1518 aa12.14□□□□□ -0.47
ACTL6A-211ENST00000487978 MRC2Q9UBG0 1479 aa12.1□□□□□ -0.47
ACTL6A-211ENST00000487978 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
ACTL6A-211ENST00000487978 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
ACTL6A-211ENST00000487978 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
ACTL6A-211ENST00000487978 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
ACTL6A-211ENST00000487978 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
ACTL6A-211ENST00000487978 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
ACTL6A-211ENST00000487978 ILDR1Q86SU0 546 aaPredicted RBP11.99□□□□□ -0.49
ACTL6A-211ENST00000487978 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
ACTL6A-211ENST00000487978 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
ACTL6A-211ENST00000487978 CYB5RLQ6IPT4 315 aa11.96□□□□□ -0.49
ACTL6A-211ENST00000487978 CADPSQ9ULU8 1353 aa11.94□□□□□ -0.5
ACTL6A-211ENST00000487978 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
ACTL6A-211ENST00000487978 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
ACTL6A-211ENST00000487978 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
ACTL6A-211ENST00000487978 RSF1Q96T23 1441 aaPredicted RBP11.84□□□□□ -0.51
ACTL6A-211ENST00000487978 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
ACTL6A-211ENST00000487978 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
ACTL6A-211ENST00000487978 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
ACTL6A-211ENST00000487978 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
ACTL6A-211ENST00000487978 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
ACTL6A-211ENST00000487978 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
ACTL6A-211ENST00000487978 CHD1O14646 1710 aa11.68□□□□□ -0.54
ACTL6A-211ENST00000487978 CFTRP13569 1480 aa11.66□□□□□ -0.54
ACTL6A-211ENST00000487978 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
ACTL6A-211ENST00000487978 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
ACTL6A-211ENST00000487978 MROH2BQ7Z745 1585 aa11.6□□□□□ -0.55
ACTL6A-211ENST00000487978 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
ACTL6A-211ENST00000487978 KCNA4P22459 653 aa11.57□□□□□ -0.56
ACTL6A-211ENST00000487978 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
ACTL6A-211ENST00000487978 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
ACTL6A-211ENST00000487978 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
ACTL6A-211ENST00000487978 ERCC6L2Q5T890 1561 aa11.51□□□□□ -0.57
ACTL6A-211ENST00000487978 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
ACTL6A-211ENST00000487978 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
ACTL6A-211ENST00000487978 GAPVD1Q14C86 1478 aa11.48□□□□□ -0.57
ACTL6A-211ENST00000487978 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
ACTL6A-211ENST00000487978 KIF13AQ9H1H9 1805 aa11.48□□□□□ -0.57
ACTL6A-211ENST00000487978 TARBP1Q13395 1621 aaKnown RBP11.47□□□□□ -0.57
ACTL6A-211ENST00000487978 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
ACTL6A-211ENST00000487978 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
ACTL6A-211ENST00000487978 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.572e-6■■■■■ 30.5
ACTL6A-211ENST00000487978 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
ACTL6A-211ENST00000487978 FBLN2P98095 1184 aa11.45□□□□□ -0.58
ACTL6A-211ENST00000487978 WIZO95785 1651 aa11.4□□□□□ -0.58
ACTL6A-211ENST00000487978 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
ACTL6A-211ENST00000487978 HECW2Q9P2P5 1572 aa11.38□□□□□ -0.59
ACTL6A-211ENST00000487978 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
ACTL6A-211ENST00000487978 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
ACTL6A-211ENST00000487978 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
ACTL6A-211ENST00000487978 SOCS7O14512 581 aa11.35□□□□□ -0.59
ACTL6A-211ENST00000487978 SNAPC4Q5SXM2 1469 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms