RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 NISCHQ9Y2I1 1504 aa39.21■■■■□ 3.87
PCOLCE-206ENST00000482863 ABCC9O60706 1549 aa35.22■■■■□ 3.23
PCOLCE-206ENST00000482863 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
PCOLCE-206ENST00000482863 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
PCOLCE-206ENST00000482863 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
PCOLCE-206ENST00000482863 NACADO15069 1562 aa33.14■■■□□ 2.9
PCOLCE-206ENST00000482863 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
PCOLCE-206ENST00000482863 PABPN1Q86U42 306 aaKnown RBP eCLIP32.89■■■□□ 2.86
PCOLCE-206ENST00000482863 UNC13AQ9UPW8 1703 aa32.66■■■□□ 2.82
PCOLCE-206ENST00000482863 MYO15BQ96JP2 1530 aa32.64■■■□□ 2.82
PCOLCE-206ENST00000482863 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
PCOLCE-206ENST00000482863 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
PCOLCE-206ENST00000482863 DCAF1Q9Y4B6 1507 aa32.27■■■□□ 2.76
PCOLCE-206ENST00000482863 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
PCOLCE-206ENST00000482863 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
PCOLCE-206ENST00000482863 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
PCOLCE-206ENST00000482863 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
PCOLCE-206ENST00000482863 CECR2Q9BXF3 1484 aa31.66■■■□□ 2.66
PCOLCE-206ENST00000482863 NCAPD3P42695 1498 aa30.65■■■□□ 2.5
PCOLCE-206ENST00000482863 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
PCOLCE-206ENST00000482863 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
PCOLCE-206ENST00000482863 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
PCOLCE-206ENST00000482863 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
PCOLCE-206ENST00000482863 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
PCOLCE-206ENST00000482863 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
PCOLCE-206ENST00000482863 NESP48681 1621 aa30.3■■■□□ 2.44
PCOLCE-206ENST00000482863 BAZ1BQ9UIG0 1483 aaKnown RBP30.3■■■□□ 2.44
PCOLCE-206ENST00000482863 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
PCOLCE-206ENST00000482863 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
PCOLCE-206ENST00000482863 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.42
PCOLCE-206ENST00000482863 CUX2O14529 1486 aa30.18■■■□□ 2.42
PCOLCE-206ENST00000482863 WIZO95785 1651 aa29.91■■■□□ 2.38
PCOLCE-206ENST00000482863 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
PCOLCE-206ENST00000482863 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
PCOLCE-206ENST00000482863 KIF21AQ7Z4S6 1674 aa29.8■■■□□ 2.36
PCOLCE-206ENST00000482863 PDS5BQ9NTI5 1447 aa29.77■■■□□ 2.36
PCOLCE-206ENST00000482863 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
PCOLCE-206ENST00000482863 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
PCOLCE-206ENST00000482863 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
PCOLCE-206ENST00000482863 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
PCOLCE-206ENST00000482863 WDR62O43379 1518 aa29.44■■■□□ 2.3
PCOLCE-206ENST00000482863 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
PCOLCE-206ENST00000482863 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
PCOLCE-206ENST00000482863 CFTRP13569 1480 aa29.42■■■□□ 2.3
PCOLCE-206ENST00000482863 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
PCOLCE-206ENST00000482863 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
PCOLCE-206ENST00000482863 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
PCOLCE-206ENST00000482863 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
PCOLCE-206ENST00000482863 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
PCOLCE-206ENST00000482863 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
PCOLCE-206ENST00000482863 TOPBP1Q92547 1522 aa28.89■■■□□ 2.21
PCOLCE-206ENST00000482863 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
PCOLCE-206ENST00000482863 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
PCOLCE-206ENST00000482863 ABCC8Q09428 1581 aa28.7■■■□□ 2.18
PCOLCE-206ENST00000482863 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.188e-7■■■□□ 16.1
PCOLCE-206ENST00000482863 EIF4G3O43432 1585 aaKnown RBP28.63■■■□□ 2.17
PCOLCE-206ENST00000482863 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
PCOLCE-206ENST00000482863 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
PCOLCE-206ENST00000482863 RAD54L2Q9Y4B4 1467 aa28.58■■■□□ 2.17
PCOLCE-206ENST00000482863 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
PCOLCE-206ENST00000482863 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
PCOLCE-206ENST00000482863 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
PCOLCE-206ENST00000482863 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
PCOLCE-206ENST00000482863 SOGA1O94964 1423 aa28.49■■■□□ 2.15
PCOLCE-206ENST00000482863 TDRD9Q8NDG6 1382 aaKnown RBP28.49■■■□□ 2.15
PCOLCE-206ENST00000482863 FBLN2P98095 1184 aa28.47■■■□□ 2.15
PCOLCE-206ENST00000482863 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
PCOLCE-206ENST00000482863 CUX1P39880 1505 aa28.43■■■□□ 2.14
PCOLCE-206ENST00000482863 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
PCOLCE-206ENST00000482863 CHD1O14646 1710 aa28.41■■■□□ 2.14
PCOLCE-206ENST00000482863 CYB5RLQ6IPT4 315 aa28.31■■■□□ 2.12
PCOLCE-206ENST00000482863 SNAPC4Q5SXM2 1469 aa28.31■■■□□ 2.12
PCOLCE-206ENST00000482863 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
PCOLCE-206ENST00000482863 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
PCOLCE-206ENST00000482863 GRIN2BQ13224 1484 aa28.18■■■□□ 2.1
PCOLCE-206ENST00000482863 WDR97A6NE52 1622 aa28.15■■■□□ 2.1
PCOLCE-206ENST00000482863 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
PCOLCE-206ENST00000482863 GAPVD1Q14C86 1478 aa28.11■■■□□ 2.09
PCOLCE-206ENST00000482863 CLASP1Q7Z460 1538 aa28.09■■■□□ 2.09
PCOLCE-206ENST00000482863 SYNJ2O15056 1496 aa28.07■■■□□ 2.08
PCOLCE-206ENST00000482863 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
PCOLCE-206ENST00000482863 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
PCOLCE-206ENST00000482863 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
PCOLCE-206ENST00000482863 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
PCOLCE-206ENST00000482863 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
PCOLCE-206ENST00000482863 WRNQ14191 1432 aaPredicted RBP eCLIP27.96■■■□□ 2.07
PCOLCE-206ENST00000482863 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
PCOLCE-206ENST00000482863 BIVM-ERCC5R4GMW8 1640 aa27.9■■■□□ 2.06
PCOLCE-206ENST00000482863 GRIN2AQ12879 1464 aa27.83■■■□□ 2.04
PCOLCE-206ENST00000482863 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
PCOLCE-206ENST00000482863 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
PCOLCE-206ENST00000482863 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
PCOLCE-206ENST00000482863 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
PCOLCE-206ENST00000482863 NUP160Q12769 1436 aa27.73■■■□□ 2.03
PCOLCE-206ENST00000482863 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
PCOLCE-206ENST00000482863 SHROOM2Q13796 1616 aa27.56■■■□□ 2
PCOLCE-206ENST00000482863 PRG4Q92954 1404 aaPredicted RBP27.51■■□□□ 1.99
PCOLCE-206ENST00000482863 JPH4Q96JJ6 628 aa27.51■■□□□ 1.99
PCOLCE-206ENST00000482863 IGF1RP08069 1367 aa27.46■■□□□ 1.99
PCOLCE-206ENST00000482863 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms