RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
DDB1-225ENST00000545930 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
DDB1-225ENST00000545930 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
DDB1-225ENST00000545930 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
DDB1-225ENST00000545930 FOXD1Q16676 465 aa23.5■■□□□ 1.35
DDB1-225ENST00000545930 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
DDB1-225ENST00000545930 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
DDB1-225ENST00000545930 MSH5O43196 834 aa22.17■■□□□ 1.14
DDB1-225ENST00000545930 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
DDB1-225ENST00000545930 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
DDB1-225ENST00000545930 ADRA2BP18089 450 aa21.84■■□□□ 1.09
DDB1-225ENST00000545930 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
DDB1-225ENST00000545930 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
DDB1-225ENST00000545930 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
DDB1-225ENST00000545930 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.8
DDB1-225ENST00000545930 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
DDB1-225ENST00000545930 PPP4R3CPQ6ZMV5 832 aa19.7■□□□□ 0.74
DDB1-225ENST00000545930 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
DDB1-225ENST00000545930 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
DDB1-225ENST00000545930 RNF216Q9NWF9 866 aaPredicted RBP19.24■□□□□ 0.67
DDB1-225ENST00000545930 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
DDB1-225ENST00000545930 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
DDB1-225ENST00000545930 ABCC9O60706 1549 aa19.05■□□□□ 0.64
DDB1-225ENST00000545930 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
DDB1-225ENST00000545930 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
DDB1-225ENST00000545930 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
DDB1-225ENST00000545930 RNF39Q9H2S5 420 aa18.84■□□□□ 0.61
DDB1-225ENST00000545930 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
DDB1-225ENST00000545930 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
DDB1-225ENST00000545930 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
DDB1-225ENST00000545930 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
DDB1-225ENST00000545930 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
DDB1-225ENST00000545930 NACADO15069 1562 aa18.64■□□□□ 0.57
DDB1-225ENST00000545930 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
DDB1-225ENST00000545930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.541e-8■■□□□ 13.1
DDB1-225ENST00000545930 KCNA4P22459 653 aa18.25■□□□□ 0.51
DDB1-225ENST00000545930 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
DDB1-225ENST00000545930 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
DDB1-225ENST00000545930 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
DDB1-225ENST00000545930 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
DDB1-225ENST00000545930 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDB1-225ENST00000545930 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
DDB1-225ENST00000545930 SLC4A2P04920 1241 aa17.77■□□□□ 0.44
DDB1-225ENST00000545930 APLP2Q06481 763 aa17.73■□□□□ 0.43
DDB1-225ENST00000545930 CAPN15O75808 1086 aa17.71■□□□□ 0.43
DDB1-225ENST00000545930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
DDB1-225ENST00000545930 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
DDB1-225ENST00000545930 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
DDB1-225ENST00000545930 DSG3P32926 999 aa17.61■□□□□ 0.41
DDB1-225ENST00000545930 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
DDB1-225ENST00000545930 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
DDB1-225ENST00000545930 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
DDB1-225ENST00000545930 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
DDB1-225ENST00000545930 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
DDB1-225ENST00000545930 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
DDB1-225ENST00000545930 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
DDB1-225ENST00000545930 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
DDB1-225ENST00000545930 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
DDB1-225ENST00000545930 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
DDB1-225ENST00000545930 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
DDB1-225ENST00000545930 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
DDB1-225ENST00000545930 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
DDB1-225ENST00000545930 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
DDB1-225ENST00000545930 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
DDB1-225ENST00000545930 ABCB7O75027 752 aa17.23■□□□□ 0.35
DDB1-225ENST00000545930 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
DDB1-225ENST00000545930 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
DDB1-225ENST00000545930 WIZO95785 1651 aa17.18■□□□□ 0.34
DDB1-225ENST00000545930 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
DDB1-225ENST00000545930 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
DDB1-225ENST00000545930 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
DDB1-225ENST00000545930 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
DDB1-225ENST00000545930 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
DDB1-225ENST00000545930 POLA2Q14181 598 aa16.95■□□□□ 0.3
DDB1-225ENST00000545930 POTEHQ6S545 545 aa16.87■□□□□ 0.29
DDB1-225ENST00000545930 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
DDB1-225ENST00000545930 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
DDB1-225ENST00000545930 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
DDB1-225ENST00000545930 ZBTB22O15209 634 aa16.73■□□□□ 0.27
DDB1-225ENST00000545930 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
DDB1-225ENST00000545930 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
DDB1-225ENST00000545930 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
DDB1-225ENST00000545930 CFTRP13569 1480 aa16.67■□□□□ 0.26
DDB1-225ENST00000545930 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
DDB1-225ENST00000545930 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
DDB1-225ENST00000545930 NESP48681 1621 aa16.56■□□□□ 0.24
DDB1-225ENST00000545930 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
DDB1-225ENST00000545930 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
DDB1-225ENST00000545930 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
DDB1-225ENST00000545930 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
DDB1-225ENST00000545930 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
DDB1-225ENST00000545930 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
DDB1-225ENST00000545930 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
DDB1-225ENST00000545930 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
DDB1-225ENST00000545930 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
DDB1-225ENST00000545930 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
DDB1-225ENST00000545930 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
DDB1-225ENST00000545930 FBLN2P98095 1184 aa16.31■□□□□ 0.2
DDB1-225ENST00000545930 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
DDB1-225ENST00000545930 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms