RNA–Protein interactions for RNA: ENST00000528861.1

TMEM135-205, Transcript of transmembrane protein 135, humanhuman

TSL 3

Gene TMEM135, Length 1,146 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM135-205ENST00000528861 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
TMEM135-205ENST00000528861 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
TMEM135-205ENST00000528861 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
TMEM135-205ENST00000528861 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
TMEM135-205ENST00000528861 FOXD1Q16676 465 aa20.87■□□□□ 0.93
TMEM135-205ENST00000528861 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
TMEM135-205ENST00000528861 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
TMEM135-205ENST00000528861 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
TMEM135-205ENST00000528861 ADRA2BP18089 450 aa19.53■□□□□ 0.72
TMEM135-205ENST00000528861 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
TMEM135-205ENST00000528861 MSH5O43196 834 aa19.41■□□□□ 0.7
TMEM135-205ENST00000528861 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
TMEM135-205ENST00000528861 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
TMEM135-205ENST00000528861 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
TMEM135-205ENST00000528861 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
TMEM135-205ENST00000528861 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
TMEM135-205ENST00000528861 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
TMEM135-205ENST00000528861 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
TMEM135-205ENST00000528861 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
TMEM135-205ENST00000528861 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
TMEM135-205ENST00000528861 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
TMEM135-205ENST00000528861 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
TMEM135-205ENST00000528861 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
TMEM135-205ENST00000528861 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
TMEM135-205ENST00000528861 KCNA4P22459 653 aa16.44■□□□□ 0.22
TMEM135-205ENST00000528861 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
TMEM135-205ENST00000528861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.193e-6■□□□□ 9.7
TMEM135-205ENST00000528861 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
TMEM135-205ENST00000528861 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
TMEM135-205ENST00000528861 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
TMEM135-205ENST00000528861 CAPN15O75808 1086 aa15.66■□□□□ 0.1
TMEM135-205ENST00000528861 DSG3P32926 999 aa15.6■□□□□ 0.09
TMEM135-205ENST00000528861 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
TMEM135-205ENST00000528861 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
TMEM135-205ENST00000528861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
TMEM135-205ENST00000528861 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
TMEM135-205ENST00000528861 APLP2Q06481 763 aa15.39■□□□□ 0.05
TMEM135-205ENST00000528861 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
TMEM135-205ENST00000528861 ABCB7O75027 752 aa15.38■□□□□ 0.05
TMEM135-205ENST00000528861 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
TMEM135-205ENST00000528861 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
TMEM135-205ENST00000528861 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
TMEM135-205ENST00000528861 POTEHQ6S545 545 aa15.21■□□□□ 0.03
TMEM135-205ENST00000528861 ZBTB22O15209 634 aa15.19■□□□□ 0.02
TMEM135-205ENST00000528861 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
TMEM135-205ENST00000528861 POLA2Q14181 598 aa15.05■□□□□ -0
TMEM135-205ENST00000528861 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
TMEM135-205ENST00000528861 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
TMEM135-205ENST00000528861 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
TMEM135-205ENST00000528861 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
TMEM135-205ENST00000528861 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
TMEM135-205ENST00000528861 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
TMEM135-205ENST00000528861 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
TMEM135-205ENST00000528861 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
TMEM135-205ENST00000528861 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
TMEM135-205ENST00000528861 FBLN2P98095 1184 aa14.35□□□□□ -0.11
TMEM135-205ENST00000528861 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
TMEM135-205ENST00000528861 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
TMEM135-205ENST00000528861 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
TMEM135-205ENST00000528861 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
TMEM135-205ENST00000528861 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
TMEM135-205ENST00000528861 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
TMEM135-205ENST00000528861 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
TMEM135-205ENST00000528861 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
TMEM135-205ENST00000528861 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
TMEM135-205ENST00000528861 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
TMEM135-205ENST00000528861 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
TMEM135-205ENST00000528861 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM135-205ENST00000528861 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
TMEM135-205ENST00000528861 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
TMEM135-205ENST00000528861 HAX1O00165 279 aa13.86□□□□□ -0.19
TMEM135-205ENST00000528861 EVX2Q03828 476 aa13.82□□□□□ -0.2
TMEM135-205ENST00000528861 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
TMEM135-205ENST00000528861 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
TMEM135-205ENST00000528861 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
TMEM135-205ENST00000528861 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
TMEM135-205ENST00000528861 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
TMEM135-205ENST00000528861 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
TMEM135-205ENST00000528861 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
TMEM135-205ENST00000528861 GABBR2O75899 941 aa13.44□□□□□ -0.26
TMEM135-205ENST00000528861 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
TMEM135-205ENST00000528861 PROM2Q8N271 834 aa13.42□□□□□ -0.26
TMEM135-205ENST00000528861 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
TMEM135-205ENST00000528861 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
TMEM135-205ENST00000528861 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
TMEM135-205ENST00000528861 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
TMEM135-205ENST00000528861 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
TMEM135-205ENST00000528861 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM135-205ENST00000528861 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
TMEM135-205ENST00000528861 CLCN6P51797 869 aa13.11□□□□□ -0.31
TMEM135-205ENST00000528861 FKBP8Q14318 412 aa13.09□□□□□ -0.31
TMEM135-205ENST00000528861 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
TMEM135-205ENST00000528861 LHX8Q68G74 356 aa13.03□□□□□ -0.32
TMEM135-205ENST00000528861 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
TMEM135-205ENST00000528861 MIER1Q8N108 512 aa13□□□□□ -0.33
TMEM135-205ENST00000528861 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
TMEM135-205ENST00000528861 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
TMEM135-205ENST00000528861 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
TMEM135-205ENST00000528861 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
TMEM135-205ENST00000528861 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms