RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
PRKCSH-218ENST00000593053 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
PRKCSH-218ENST00000593053 ABCC9O60706 1549 aa28.7■■■□□ 2.19
PRKCSH-218ENST00000593053 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
PRKCSH-218ENST00000593053 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
PRKCSH-218ENST00000593053 NACADO15069 1562 aa27.25■■□□□ 1.95
PRKCSH-218ENST00000593053 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.91
PRKCSH-218ENST00000593053 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
PRKCSH-218ENST00000593053 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
PRKCSH-218ENST00000593053 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
PRKCSH-218ENST00000593053 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
PRKCSH-218ENST00000593053 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
PRKCSH-218ENST00000593053 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
PRKCSH-218ENST00000593053 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
PRKCSH-218ENST00000593053 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
PRKCSH-218ENST00000593053 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
PRKCSH-218ENST00000593053 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
PRKCSH-218ENST00000593053 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
PRKCSH-218ENST00000593053 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
PRKCSH-218ENST00000593053 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
PRKCSH-218ENST00000593053 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
PRKCSH-218ENST00000593053 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
PRKCSH-218ENST00000593053 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
PRKCSH-218ENST00000593053 HMGXB3Q12766 1538 aa25■■□□□ 1.59
PRKCSH-218ENST00000593053 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
PRKCSH-218ENST00000593053 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
PRKCSH-218ENST00000593053 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
PRKCSH-218ENST00000593053 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
PRKCSH-218ENST00000593053 NESP48681 1621 aa24.72■■□□□ 1.55
PRKCSH-218ENST00000593053 WIZO95785 1651 aa24.61■■□□□ 1.53
PRKCSH-218ENST00000593053 CUX2O14529 1486 aa24.6■■□□□ 1.53
PRKCSH-218ENST00000593053 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
PRKCSH-218ENST00000593053 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
PRKCSH-218ENST00000593053 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
PRKCSH-218ENST00000593053 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
PRKCSH-218ENST00000593053 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
PRKCSH-218ENST00000593053 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
PRKCSH-218ENST00000593053 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
PRKCSH-218ENST00000593053 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
PRKCSH-218ENST00000593053 CFTRP13569 1480 aa24.21■■□□□ 1.47
PRKCSH-218ENST00000593053 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
PRKCSH-218ENST00000593053 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
PRKCSH-218ENST00000593053 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
PRKCSH-218ENST00000593053 WDR62O43379 1518 aa24.11■■□□□ 1.45
PRKCSH-218ENST00000593053 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
PRKCSH-218ENST00000593053 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
PRKCSH-218ENST00000593053 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
PRKCSH-218ENST00000593053 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
PRKCSH-218ENST00000593053 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
PRKCSH-218ENST00000593053 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
PRKCSH-218ENST00000593053 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
PRKCSH-218ENST00000593053 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
PRKCSH-218ENST00000593053 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
PRKCSH-218ENST00000593053 OSCARQ8IYS5 282 aa23.56■■□□□ 1.36
PRKCSH-218ENST00000593053 POLA1P09884 1462 aaPredicted RBP23.5■■□□□ 1.35
PRKCSH-218ENST00000593053 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-218ENST00000593053 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-218ENST00000593053 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.349e-8■■■■■ 30.5
PRKCSH-218ENST00000593053 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
PRKCSH-218ENST00000593053 SOGA1O94964 1423 aa23.42■■□□□ 1.34
PRKCSH-218ENST00000593053 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
PRKCSH-218ENST00000593053 CUX1P39880 1505 aa23.41■■□□□ 1.34
PRKCSH-218ENST00000593053 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
PRKCSH-218ENST00000593053 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
PRKCSH-218ENST00000593053 FBLN2P98095 1184 aa23.28■■□□□ 1.32
PRKCSH-218ENST00000593053 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
PRKCSH-218ENST00000593053 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
PRKCSH-218ENST00000593053 CHD1O14646 1710 aa23.19■■□□□ 1.3
PRKCSH-218ENST00000593053 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
PRKCSH-218ENST00000593053 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
PRKCSH-218ENST00000593053 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
PRKCSH-218ENST00000593053 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
PRKCSH-218ENST00000593053 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
PRKCSH-218ENST00000593053 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
PRKCSH-218ENST00000593053 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
PRKCSH-218ENST00000593053 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
PRKCSH-218ENST00000593053 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
PRKCSH-218ENST00000593053 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
PRKCSH-218ENST00000593053 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
PRKCSH-218ENST00000593053 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
PRKCSH-218ENST00000593053 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
PRKCSH-218ENST00000593053 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
PRKCSH-218ENST00000593053 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
PRKCSH-218ENST00000593053 PBRM1Q86U86 1689 aa23.02■■□□□ 1.28
PRKCSH-218ENST00000593053 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
PRKCSH-218ENST00000593053 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
PRKCSH-218ENST00000593053 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
PRKCSH-218ENST00000593053 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
PRKCSH-218ENST00000593053 ADAMTS12P58397 1594 aa22.87■■□□□ 1.25
PRKCSH-218ENST00000593053 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
PRKCSH-218ENST00000593053 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
PRKCSH-218ENST00000593053 NUP160Q12769 1436 aa22.79■■□□□ 1.24
PRKCSH-218ENST00000593053 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
PRKCSH-218ENST00000593053 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
PRKCSH-218ENST00000593053 TRHP20396 242 aaPredicted RBP22.69■■□□□ 1.22
PRKCSH-218ENST00000593053 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
PRKCSH-218ENST00000593053 IGF1RP08069 1367 aa22.65■■□□□ 1.22
PRKCSH-218ENST00000593053 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
PRKCSH-218ENST00000593053 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
PRKCSH-218ENST00000593053 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms