Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS1BP61024 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
CKS1BP61024 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 AC006455.2-201ENST00000429931 906 ntBASIC14.13□□□□□ -0.15
CKS1BP61024 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CKS1BP61024 AC009299.2-201ENST00000482477 511 ntBASIC14.13□□□□□ -0.15
CKS1BP61024 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS1BP61024 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS1BP61024 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS1BP61024 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 SRD5A1P1-201ENST00000442297 786 ntBASIC14.12□□□□□ -0.15
CKS1BP61024 OR2I1P-207ENST00000453522 948 ntBASIC14.12□□□□□ -0.15
CKS1BP61024 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.12□□□□□ -0.15
CKS1BP61024 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CKS1BP61024 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS1BP61024 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CKS1BP61024 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CKS1BP61024 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 RARRES2P1-201ENST00000474487 481 ntBASIC14.11□□□□□ -0.15
CKS1BP61024 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS1BP61024 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.11□□□□□ -0.15
CKS1BP61024 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CKS1BP61024 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS1BP61024 NEFHP1-201ENST00000412845 2629 ntBASIC14.11□□□□□ -0.15
CKS1BP61024 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CKS1BP61024 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms