RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
SMPD2-201ENST00000258052 CCDC180Q9P1Z9 1646 aa42.52■■■■■ 4.4
SMPD2-201ENST00000258052 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
SMPD2-201ENST00000258052 ABCC9O60706 1549 aa40.44■■■■■ 4.06
SMPD2-201ENST00000258052 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
SMPD2-201ENST00000258052 DCAF1Q9Y4B6 1507 aa40.15■■■■■ 4.02
SMPD2-201ENST00000258052 MYO15BQ96JP2 1530 aa39.77■■■■□ 3.96
SMPD2-201ENST00000258052 NACADO15069 1562 aa39.64■■■■□ 3.94
SMPD2-201ENST00000258052 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
SMPD2-201ENST00000258052 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.89
SMPD2-201ENST00000258052 SCRIBQ14160 1630 aa39.1■■■■□ 3.85
SMPD2-201ENST00000258052 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
SMPD2-201ENST00000258052 BICRAQ9NZM4 1560 aa38.17■■■■□ 3.7
SMPD2-201ENST00000258052 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
SMPD2-201ENST00000258052 SUPT5HO00267 1087 aaKnown RBP37.88■■■■□ 3.65
SMPD2-201ENST00000258052 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
SMPD2-201ENST00000258052 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
SMPD2-201ENST00000258052 BAZ1AQ9NRL2 1556 aaPredicted RBP37.56■■■■□ 3.6
SMPD2-201ENST00000258052 MROH2BQ7Z745 1585 aa37.54■■■■□ 3.6
SMPD2-201ENST00000258052 SMARCA4P51532 1647 aa37.44■■■■□ 3.58
SMPD2-201ENST00000258052 WIZO95785 1651 aa37.26■■■■□ 3.55
SMPD2-201ENST00000258052 EIF4G1Q04637 1599 aaKnown RBP37.06■■■■□ 3.52
SMPD2-201ENST00000258052 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
SMPD2-201ENST00000258052 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
SMPD2-201ENST00000258052 TOP2AP11388 1531 aaKnown RBP36.84■■■■□ 3.49
SMPD2-201ENST00000258052 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
SMPD2-201ENST00000258052 BAZ1BQ9UIG0 1483 aaKnown RBP36.66■■■■□ 3.46
SMPD2-201ENST00000258052 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
SMPD2-201ENST00000258052 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
SMPD2-201ENST00000258052 HMGXB3Q12766 1538 aa36.51■■■■□ 3.44
SMPD2-201ENST00000258052 CCDC88BA6NC98 1476 aa36.45■■■■□ 3.43
SMPD2-201ENST00000258052 CHIC1Q5VXU3 224 aa36.1■■■■□ 3.37
SMPD2-201ENST00000258052 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
SMPD2-201ENST00000258052 CFTRP13569 1480 aa35.69■■■■□ 3.3
SMPD2-201ENST00000258052 ABCC8Q09428 1581 aa35.63■■■■□ 3.29
SMPD2-201ENST00000258052 TRIM41Q8WV44 630 aa35.63■■■■□ 3.29
SMPD2-201ENST00000258052 CADPSQ9ULU8 1353 aa35.62■■■■□ 3.29
SMPD2-201ENST00000258052 PRDM2Q13029 1718 aa35.57■■■■□ 3.29
SMPD2-201ENST00000258052 NESP48681 1621 aa35.42■■■■□ 3.26
SMPD2-201ENST00000258052 WRNQ14191 1432 aaPredicted RBP eCLIP35.41■■■■□ 3.26
SMPD2-201ENST00000258052 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
SMPD2-201ENST00000258052 SYNJ1O43426 1573 aa35.3■■■■□ 3.24
SMPD2-201ENST00000258052 FANCD2Q9BXW9 1451 aa35.25■■■■□ 3.23
SMPD2-201ENST00000258052 TOP2BQ02880 1626 aa35.16■■■■□ 3.22
SMPD2-201ENST00000258052 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
SMPD2-201ENST00000258052 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
SMPD2-201ENST00000258052 CUX1P39880 1505 aa35.12■■■■□ 3.21
SMPD2-201ENST00000258052 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
SMPD2-201ENST00000258052 KIF21AQ7Z4S6 1674 aa35.02■■■■□ 3.2
SMPD2-201ENST00000258052 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
SMPD2-201ENST00000258052 DNMBPQ6XZF7 1577 aa34.9■■■■□ 3.18
SMPD2-201ENST00000258052 SOGA1O94964 1423 aa34.88■■■■□ 3.17
SMPD2-201ENST00000258052 TOPBP1Q92547 1522 aa34.85■■■■□ 3.17
SMPD2-201ENST00000258052 URB2Q14146 1524 aaKnown RBP34.82■■■■□ 3.16
SMPD2-201ENST00000258052 FGD5Q6ZNL6 1462 aa34.79■■■■□ 3.16
SMPD2-201ENST00000258052 RUSC2Q8N2Y8 1516 aa34.77■■■■□ 3.16
SMPD2-201ENST00000258052 EEA1Q15075 1411 aa34.76■■■■□ 3.16
SMPD2-201ENST00000258052 LOC105371045A0A1W2PR82 267 aa34.73■■■■□ 3.15
SMPD2-201ENST00000258052 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
SMPD2-201ENST00000258052 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
SMPD2-201ENST00000258052 POLA1P09884 1462 aaPredicted RBP34.64■■■■□ 3.14
SMPD2-201ENST00000258052 CSRNP3Q8WYN3 585 aa34.6■■■■□ 3.13
SMPD2-201ENST00000258052 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
SMPD2-201ENST00000258052 KIF27Q86VH2 1401 aa34.54■■■■□ 3.12
SMPD2-201ENST00000258052 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
SMPD2-201ENST00000258052 CUX2O14529 1486 aa34.52■■■■□ 3.12
SMPD2-201ENST00000258052 WDR62O43379 1518 aa34.52■■■■□ 3.12
SMPD2-201ENST00000258052 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
SMPD2-201ENST00000258052 ABCA10Q8WWZ4 1543 aa34.46■■■■□ 3.11
SMPD2-201ENST00000258052 WDR97A6NE52 1622 aa34.4■■■■□ 3.1
SMPD2-201ENST00000258052 KIF21BO75037 1637 aa34.35■■■■□ 3.09
SMPD2-201ENST00000258052 TARBP1Q13395 1621 aaKnown RBP34.34■■■■□ 3.09
SMPD2-201ENST00000258052 GOLGA3Q08378 1498 aa34.3■■■■□ 3.08
SMPD2-201ENST00000258052 IGF1RP08069 1367 aa34.23■■■■□ 3.07
SMPD2-201ENST00000258052 IFT140Q96RY7 1462 aa34.23■■■■□ 3.07
SMPD2-201ENST00000258052 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
SMPD2-201ENST00000258052 PRXQ9BXM0 1461 aa34.22■■■■□ 3.07
SMPD2-201ENST00000258052 ABCA5Q8WWZ7 1642 aa34.22■■■■□ 3.07
SMPD2-201ENST00000258052 RAPGEF2Q9Y4G8 1499 aa34.19■■■■□ 3.06
SMPD2-201ENST00000258052 UBTFP17480 764 aaKnown RBP34.17■■■■□ 3.06
SMPD2-201ENST00000258052 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
SMPD2-201ENST00000258052 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
SMPD2-201ENST00000258052 TNIKQ9UKE5 1360 aa34.11■■■■□ 3.05
SMPD2-201ENST00000258052 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
SMPD2-201ENST00000258052 ZNF608Q9ULD9 1512 aaPredicted RBP34.05■■■■□ 3.04
SMPD2-201ENST00000258052 CUL7Q14999 1698 aa34.05■■■■□ 3.04
SMPD2-201ENST00000258052 AQRO60306 1485 aaKnown RBP eCLIP34.05■■■■□ 3.042e-6■■■■□ 22.5
SMPD2-201ENST00000258052 PBRM1Q86U86 1689 aa34.03■■■■□ 3.04
SMPD2-201ENST00000258052 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
SMPD2-201ENST00000258052 CEP162Q5TB80 1403 aa33.94■■■■□ 3.02
SMPD2-201ENST00000258052 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
SMPD2-201ENST00000258052 ADAMTS12P58397 1594 aa33.8■■■■□ 3
SMPD2-201ENST00000258052 FHAD1B1AJZ9 1412 aa33.77■■■■□ 3
SMPD2-201ENST00000258052 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
SMPD2-201ENST00000258052 CLIP1P30622 1438 aa33.73■■■□□ 2.99
SMPD2-201ENST00000258052 RANGAP1P46060 587 aaPredicted RBP33.72■■■□□ 2.99
SMPD2-201ENST00000258052 CTTNBP2Q8WZ74 1663 aa33.66■■■□□ 2.98
SMPD2-201ENST00000258052 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
SMPD2-201ENST00000258052 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
SMPD2-201ENST00000258052 GRIN2AQ12879 1464 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms