Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN20P56880 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN20P56880 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN20P56880 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.59■□□□□ 0.57
CLDN20P56880 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN20P56880 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN20P56880 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN20P56880 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN20P56880 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN20P56880 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN20P56880 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN20P56880 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.58■□□□□ 0.57
CLDN20P56880 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN20P56880 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CLDN20P56880 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN20P56880 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN20P56880 AC007322.3-201ENST00000426526 701 ntBASIC18.58■□□□□ 0.56
CLDN20P56880 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN20P56880 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.58■□□□□ 0.56
CLDN20P56880 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN20P56880 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CLDN20P56880 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CLDN20P56880 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN20P56880 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN20P56880 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CLDN20P56880 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN20P56880 AC116050.2-201ENST00000612102 1779 ntBASIC18.58■□□□□ 0.56
CLDN20P56880 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN20P56880 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 AL355802.2-201ENST00000402069 882 ntBASIC18.57■□□□□ 0.56
CLDN20P56880 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 FAM21FP-204ENST00000608637 956 ntBASIC18.57■□□□□ 0.56
CLDN20P56880 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 AL049796.1-201ENST00000565336 1766 ntBASIC18.57■□□□□ 0.56
CLDN20P56880 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLDN20P56880 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN20P56880 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN20P56880 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN20P56880 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLDN20P56880 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN20P56880 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 MKRN4P-201ENST00000444706 1521 ntBASIC18.56■□□□□ 0.56
CLDN20P56880 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN20P56880 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 SLC29A4P1-201ENST00000398760 971 ntBASIC18.56■□□□□ 0.56
CLDN20P56880 AL512625.2-201ENST00000417533 625 ntBASIC18.56■□□□□ 0.56
CLDN20P56880 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN20P56880 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN20P56880 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN20P56880 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN20P56880 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN20P56880 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN20P56880 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN20P56880 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN20P56880 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN20P56880 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN20P56880 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN20P56880 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN20P56880 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN20P56880 AC010980.2-201ENST00000587099 1412 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms