RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
CNTNAP3B-202ENST00000341990 SHROOM4Q9ULL8 1493 aa35.28■■■■□ 3.24
CNTNAP3B-202ENST00000341990 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
CNTNAP3B-202ENST00000341990 SUPT5HO00267 1087 aaKnown RBP34.65■■■■□ 3.14
CNTNAP3B-202ENST00000341990 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
CNTNAP3B-202ENST00000341990 DCAF8L2P0C7V8 631 aa34.1■■■■□ 3.05
CNTNAP3B-202ENST00000341990 CHIC1Q5VXU3 224 aa33.7■■■□□ 2.99
CNTNAP3B-202ENST00000341990 MYO15BQ96JP2 1530 aa33.69■■■□□ 2.98
CNTNAP3B-202ENST00000341990 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
CNTNAP3B-202ENST00000341990 HRCP23327 699 aa32.95■■■□□ 2.87
CNTNAP3B-202ENST00000341990 PCGF6Q9BYE7 350 aa32.91■■■□□ 2.86
CNTNAP3B-202ENST00000341990 LOC105371045A0A1W2PR82 267 aa32.82■■■□□ 2.84
CNTNAP3B-202ENST00000341990 ABCC9O60706 1549 aa32.74■■■□□ 2.83
CNTNAP3B-202ENST00000341990 SCRIBQ14160 1630 aa32.67■■■□□ 2.82
CNTNAP3B-202ENST00000341990 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
CNTNAP3B-202ENST00000341990 PPARGC1BQ86YN6 1023 aaKnown RBP32.41■■■□□ 2.78
CNTNAP3B-202ENST00000341990 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
CNTNAP3B-202ENST00000341990 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
CNTNAP3B-202ENST00000341990 TRIM26Q12899 539 aaPredicted RBP32.12■■■□□ 2.73
CNTNAP3B-202ENST00000341990 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
CNTNAP3B-202ENST00000341990 FAM9AQ8IZU1 332 aaPredicted RBP32.04■■■□□ 2.72
CNTNAP3B-202ENST00000341990 NACADO15069 1562 aa31.98■■■□□ 2.71
CNTNAP3B-202ENST00000341990 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
CNTNAP3B-202ENST00000341990 EHMT2Q96KQ7 1210 aa31.87■■■□□ 2.69
CNTNAP3B-202ENST00000341990 WIZO95785 1651 aa31.76■■■□□ 2.67
CNTNAP3B-202ENST00000341990 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
CNTNAP3B-202ENST00000341990 ZEB1P37275 1124 aaPredicted RBP31.38■■■□□ 2.61
CNTNAP3B-202ENST00000341990 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
CNTNAP3B-202ENST00000341990 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
CNTNAP3B-202ENST00000341990 ABCC8Q09428 1581 aa31.16■■■□□ 2.58
CNTNAP3B-202ENST00000341990 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
CNTNAP3B-202ENST00000341990 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
CNTNAP3B-202ENST00000341990 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
CNTNAP3B-202ENST00000341990 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
CNTNAP3B-202ENST00000341990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.94■■■□□ 2.54
CNTNAP3B-202ENST00000341990 SOGA1O94964 1423 aa30.91■■■□□ 2.54
CNTNAP3B-202ENST00000341990 TTBK1Q5TCY1 1321 aaPredicted RBP30.88■■■□□ 2.53
CNTNAP3B-202ENST00000341990 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
CNTNAP3B-202ENST00000341990 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
CNTNAP3B-202ENST00000341990 CCER1Q8TC90 406 aaPredicted RBP30.79■■■□□ 2.52
CNTNAP3B-202ENST00000341990 RUSC2Q8N2Y8 1516 aa30.78■■■□□ 2.52
CNTNAP3B-202ENST00000341990 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
CNTNAP3B-202ENST00000341990 CSRNP3Q8WYN3 585 aa30.68■■■□□ 2.5
CNTNAP3B-202ENST00000341990 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
CNTNAP3B-202ENST00000341990 TNIKQ9UKE5 1360 aa30.67■■■□□ 2.5
CNTNAP3B-202ENST00000341990 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
CNTNAP3B-202ENST00000341990 EEA1Q15075 1411 aa30.58■■■□□ 2.49
CNTNAP3B-202ENST00000341990 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
CNTNAP3B-202ENST00000341990 GOLGA3Q08378 1498 aa30.47■■■□□ 2.47
CNTNAP3B-202ENST00000341990 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
CNTNAP3B-202ENST00000341990 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
CNTNAP3B-202ENST00000341990 ATAD2BQ9ULI0 1458 aa30.32■■■□□ 2.44
CNTNAP3B-202ENST00000341990 DIEXFQ68CQ4 756 aaKnown RBP30.28■■■□□ 2.44
CNTNAP3B-202ENST00000341990 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
CNTNAP3B-202ENST00000341990 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
CNTNAP3B-202ENST00000341990 KIF21BO75037 1637 aa30.2■■■□□ 2.43
CNTNAP3B-202ENST00000341990 CLIP1P30622 1438 aa30.18■■■□□ 2.42
CNTNAP3B-202ENST00000341990 NEUROD1Q13562 356 aa30.15■■■□□ 2.42
CNTNAP3B-202ENST00000341990 RAPGEF2Q9Y4G8 1499 aa30.13■■■□□ 2.41
CNTNAP3B-202ENST00000341990 RANGAP1P46060 587 aaPredicted RBP30.12■■■□□ 2.41
CNTNAP3B-202ENST00000341990 HNRNPUL2Q1KMD3 747 aaKnown RBP30.12■■■□□ 2.41
CNTNAP3B-202ENST00000341990 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
CNTNAP3B-202ENST00000341990 VPS8Q8N3P4 1428 aa30.04■■■□□ 2.4
CNTNAP3B-202ENST00000341990 ZNF316A6NFI3 1004 aaPredicted RBP29.96■■■□□ 2.39
CNTNAP3B-202ENST00000341990 TOP2BQ02880 1626 aa29.94■■■□□ 2.38
CNTNAP3B-202ENST00000341990 APLP2Q06481 763 aa29.91■■■□□ 2.38
CNTNAP3B-202ENST00000341990 CENPBP07199 599 aaPredicted RBP29.85■■■□□ 2.37
CNTNAP3B-202ENST00000341990 GTF3C3Q9Y5Q9 886 aa29.83■■■□□ 2.37
CNTNAP3B-202ENST00000341990 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
CNTNAP3B-202ENST00000341990 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
CNTNAP3B-202ENST00000341990 PRXQ9BXM0 1461 aa29.73■■■□□ 2.35
CNTNAP3B-202ENST00000341990 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
CNTNAP3B-202ENST00000341990 CUX1P39880 1505 aa29.68■■■□□ 2.34
CNTNAP3B-202ENST00000341990 YTHDC1Q96MU7 727 aaKnown RBP29.68■■■□□ 2.34
CNTNAP3B-202ENST00000341990 ERICH3Q5RHP9 1530 aa29.67■■■□□ 2.34
CNTNAP3B-202ENST00000341990 MIER1Q8N108 512 aa29.65■■■□□ 2.34
CNTNAP3B-202ENST00000341990 NCAPD3P42695 1498 aa29.64■■■□□ 2.34
CNTNAP3B-202ENST00000341990 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
CNTNAP3B-202ENST00000341990 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
CNTNAP3B-202ENST00000341990 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
CNTNAP3B-202ENST00000341990 CFTRP13569 1480 aa29.49■■■□□ 2.31
CNTNAP3B-202ENST00000341990 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
CNTNAP3B-202ENST00000341990 ARHGAP35Q9NRY4 1499 aa29.4■■■□□ 2.3
CNTNAP3B-202ENST00000341990 RRBP1Q9P2E9 1410 aaKnown RBP29.35■■■□□ 2.29
CNTNAP3B-202ENST00000341990 CLSPNQ9HAW4 1339 aa29.33■■■□□ 2.29
CNTNAP3B-202ENST00000341990 ITGAEP38570 1179 aa29.29■■■□□ 2.28
CNTNAP3B-202ENST00000341990 CUX2O14529 1486 aa29.28■■■□□ 2.28
CNTNAP3B-202ENST00000341990 CCNB3Q8WWL7 1395 aa29.26■■■□□ 2.28
CNTNAP3B-202ENST00000341990 IGF1RP08069 1367 aa29.25■■■□□ 2.27
CNTNAP3B-202ENST00000341990 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
CNTNAP3B-202ENST00000341990 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
CNTNAP3B-202ENST00000341990 FGD5Q6ZNL6 1462 aa29.12■■■□□ 2.25
CNTNAP3B-202ENST00000341990 CARMIL1Q5VZK9 1371 aa29.12■■■□□ 2.25
CNTNAP3B-202ENST00000341990 TIAM1Q13009 1591 aa29.06■■■□□ 2.24
CNTNAP3B-202ENST00000341990 RAB3GAP2Q9H2M9 1393 aa29.06■■■□□ 2.24
CNTNAP3B-202ENST00000341990 P3H3Q8IVL6 736 aa29.01■■■□□ 2.24
CNTNAP3B-202ENST00000341990 PHLDB1Q86UU1 1377 aa28.98■■■□□ 2.23
CNTNAP3B-202ENST00000341990 LRRC9Q6ZRR7 1453 aa28.97■■■□□ 2.23
CNTNAP3B-202ENST00000341990 MAPKBP1O60336 1514 aa28.96■■■□□ 2.23
CNTNAP3B-202ENST00000341990 MAP3K1Q13233 1512 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms