Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
PCDHGC4Q9Y5F7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGC4Q9Y5F7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PCDHGC4Q9Y5F7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGC4Q9Y5F7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGC4Q9Y5F7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGC4Q9Y5F7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGC4Q9Y5F7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGC4Q9Y5F7 AC044849.2-201ENST00000606596 710 ntBASIC26.61■■□□□ 1.85
PCDHGC4Q9Y5F7 ST7-AS1-201ENST00000456775 1889 ntBASIC26.61■■□□□ 1.85
PCDHGC4Q9Y5F7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHGC4Q9Y5F7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.6■■□□□ 1.85
PCDHGC4Q9Y5F7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHGC4Q9Y5F7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC4Q9Y5F7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC4Q9Y5F7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
PCDHGC4Q9Y5F7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC4Q9Y5F7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGC4Q9Y5F7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGC4Q9Y5F7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHGC4Q9Y5F7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGC4Q9Y5F7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PCDHGC4Q9Y5F7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGC4Q9Y5F7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHGC4Q9Y5F7 MIR6090-201ENST00000622481 60 ntBASIC26.56■■□□□ 1.84
PCDHGC4Q9Y5F7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
PCDHGC4Q9Y5F7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHGC4Q9Y5F7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGC4Q9Y5F7 AC108673.1-201ENST00000510422 1159 ntBASIC26.54■■□□□ 1.84
PCDHGC4Q9Y5F7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHGC4Q9Y5F7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGC4Q9Y5F7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGC4Q9Y5F7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGC4Q9Y5F7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC4Q9Y5F7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC4Q9Y5F7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC4Q9Y5F7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC4Q9Y5F7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHGC4Q9Y5F7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGC4Q9Y5F7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PCDHGC4Q9Y5F7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGC4Q9Y5F7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDHGC4Q9Y5F7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGC4Q9Y5F7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHGC4Q9Y5F7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGC4Q9Y5F7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.48■■□□□ 1.83
PCDHGC4Q9Y5F7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PCDHGC4Q9Y5F7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGC4Q9Y5F7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDHGC4Q9Y5F7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHGC4Q9Y5F7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHGC4Q9Y5F7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHGC4Q9Y5F7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.44■■□□□ 1.82
PCDHGC4Q9Y5F7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGC4Q9Y5F7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGC4Q9Y5F7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHGC4Q9Y5F7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC4Q9Y5F7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC4Q9Y5F7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC4Q9Y5F7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
PCDHGC4Q9Y5F7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGC4Q9Y5F7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGC4Q9Y5F7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGC4Q9Y5F7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGC4Q9Y5F7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHGC4Q9Y5F7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHGC4Q9Y5F7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGC4Q9Y5F7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
PCDHGC4Q9Y5F7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGC4Q9Y5F7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PCDHGC4Q9Y5F7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGC4Q9Y5F7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.37■■□□□ 1.81
PCDHGC4Q9Y5F7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGC4Q9Y5F7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGC4Q9Y5F7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHGC4Q9Y5F7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGC4Q9Y5F7 AC127502.1-201ENST00000399971 1502 ntBASIC26.34■■□□□ 1.81
PCDHGC4Q9Y5F7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGC4Q9Y5F7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHGC4Q9Y5F7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGC4Q9Y5F7 DUX4L29-201ENST00000425409 679 ntBASIC26.32■■□□□ 1.8
PCDHGC4Q9Y5F7 AC021231.2-201ENST00000594613 730 ntBASIC26.32■■□□□ 1.8
PCDHGC4Q9Y5F7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGC4Q9Y5F7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.31■■□□□ 1.8
PCDHGC4Q9Y5F7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
PCDHGC4Q9Y5F7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PCDHGC4Q9Y5F7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PCDHGC4Q9Y5F7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGC4Q9Y5F7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGC4Q9Y5F7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGC4Q9Y5F7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDHGC4Q9Y5F7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGC4Q9Y5F7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms