Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM17Q9Y577 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.68■■■□□ 2.5
TRIM17Q9Y577 RNF126P1-201ENST00000567452 1320 ntBASIC30.68■■■□□ 2.5
TRIM17Q9Y577 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.65■■■□□ 2.5
TRIM17Q9Y577 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.65■■■□□ 2.5
TRIM17Q9Y577 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
TRIM17Q9Y577 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TRIM17Q9Y577 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM17Q9Y577 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.61■■■□□ 2.49
TRIM17Q9Y577 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
TRIM17Q9Y577 AC012354.3-201ENST00000623734 483 ntBASIC30.6■■■□□ 2.49
TRIM17Q9Y577 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM17Q9Y577 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIM17Q9Y577 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TRIM17Q9Y577 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM17Q9Y577 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TRIM17Q9Y577 NTF6A-201ENST00000591175 560 ntBASIC30.55■■■□□ 2.48
TRIM17Q9Y577 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.54■■■□□ 2.48
TRIM17Q9Y577 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
TRIM17Q9Y577 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM17Q9Y577 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.5■■■□□ 2.47
TRIM17Q9Y577 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM17Q9Y577 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM17Q9Y577 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.48■■■□□ 2.47
TRIM17Q9Y577 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.45■■■□□ 2.47
TRIM17Q9Y577 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM17Q9Y577 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.46
TRIM17Q9Y577 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM17Q9Y577 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRIM17Q9Y577 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TRIM17Q9Y577 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TRIM17Q9Y577 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
TRIM17Q9Y577 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
TRIM17Q9Y577 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
TRIM17Q9Y577 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.39■■■□□ 2.46
TRIM17Q9Y577 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
TRIM17Q9Y577 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.39■■■□□ 2.45
TRIM17Q9Y577 AC018358.1-201ENST00000631079 1402 ntBASIC30.39■■■□□ 2.45
TRIM17Q9Y577 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 AL033527.3-201ENST00000566366 1196 ntBASIC30.37■■■□□ 2.45
TRIM17Q9Y577 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM17Q9Y577 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM17Q9Y577 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM17Q9Y577 AC008813.1-201ENST00000536597 885 ntBASIC30.35■■■□□ 2.45
TRIM17Q9Y577 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.34■■■□□ 2.45
TRIM17Q9Y577 AC022413.1-201ENST00000624602 984 ntBASIC30.34■■■□□ 2.45
TRIM17Q9Y577 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM17Q9Y577 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM17Q9Y577 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM17Q9Y577 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
TRIM17Q9Y577 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
TRIM17Q9Y577 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM17Q9Y577 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM17Q9Y577 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.23■■■□□ 2.43
TRIM17Q9Y577 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.21■■■□□ 2.43
TRIM17Q9Y577 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.21■■■□□ 2.43
TRIM17Q9Y577 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM17Q9Y577 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.19■■■□□ 2.42
TRIM17Q9Y577 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms