Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM17Q9Y577 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.68■■■□□ 2.5
TRIM17Q9Y577 RNF126P1-201ENST00000567452 1320 ntBASIC30.68■■■□□ 2.5
TRIM17Q9Y577 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM17Q9Y577 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM17Q9Y577 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.65■■■□□ 2.5
TRIM17Q9Y577 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.65■■■□□ 2.5
TRIM17Q9Y577 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
TRIM17Q9Y577 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TRIM17Q9Y577 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM17Q9Y577 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.61■■■□□ 2.49
TRIM17Q9Y577 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
TRIM17Q9Y577 AC012354.3-201ENST00000623734 483 ntBASIC30.6■■■□□ 2.49
TRIM17Q9Y577 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM17Q9Y577 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIM17Q9Y577 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TRIM17Q9Y577 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM17Q9Y577 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TRIM17Q9Y577 NTF6A-201ENST00000591175 560 ntBASIC30.55■■■□□ 2.48
TRIM17Q9Y577 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.54■■■□□ 2.48
TRIM17Q9Y577 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
TRIM17Q9Y577 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM17Q9Y577 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM17Q9Y577 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.5■■■□□ 2.47
TRIM17Q9Y577 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM17Q9Y577 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM17Q9Y577 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.48■■■□□ 2.47
TRIM17Q9Y577 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM17Q9Y577 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM17Q9Y577 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.45■■■□□ 2.47
TRIM17Q9Y577 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM17Q9Y577 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.46
TRIM17Q9Y577 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM17Q9Y577 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRIM17Q9Y577 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TRIM17Q9Y577 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TRIM17Q9Y577 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
TRIM17Q9Y577 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
TRIM17Q9Y577 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
TRIM17Q9Y577 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.39■■■□□ 2.46
TRIM17Q9Y577 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
TRIM17Q9Y577 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.39■■■□□ 2.45
TRIM17Q9Y577 AC018358.1-201ENST00000631079 1402 ntBASIC30.39■■■□□ 2.45
TRIM17Q9Y577 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM17Q9Y577 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 AL033527.3-201ENST00000566366 1196 ntBASIC30.37■■■□□ 2.45
TRIM17Q9Y577 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM17Q9Y577 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM17Q9Y577 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM17Q9Y577 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRIM17Q9Y577 AC008813.1-201ENST00000536597 885 ntBASIC30.35■■■□□ 2.45
TRIM17Q9Y577 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.34■■■□□ 2.45
TRIM17Q9Y577 AC022413.1-201ENST00000624602 984 ntBASIC30.34■■■□□ 2.45
TRIM17Q9Y577 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.33■■■□□ 2.45
TRIM17Q9Y577 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM17Q9Y577 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM17Q9Y577 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM17Q9Y577 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TRIM17Q9Y577 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
TRIM17Q9Y577 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
TRIM17Q9Y577 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.25■■■□□ 2.43
TRIM17Q9Y577 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM17Q9Y577 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM17Q9Y577 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.23■■■□□ 2.43
TRIM17Q9Y577 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM17Q9Y577 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.21■■■□□ 2.43
TRIM17Q9Y577 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.21■■■□□ 2.43
TRIM17Q9Y577 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM17Q9Y577 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.19■■■□□ 2.42
TRIM17Q9Y577 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.18■■■□□ 2.42
TRIM17Q9Y577 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms