Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 AC010864.1-201ENST00000609407 1511 ntBASIC21.91■■□□□ 1.1
TPRX1Q8N7U7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPRX1Q8N7U7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.91■■□□□ 1.1
TPRX1Q8N7U7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPRX1Q8N7U7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPRX1Q8N7U7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TPRX1Q8N7U7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPRX1Q8N7U7 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.87■■□□□ 1.09
TPRX1Q8N7U7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPRX1Q8N7U7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPRX1Q8N7U7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPRX1Q8N7U7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.86■■□□□ 1.09
TPRX1Q8N7U7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPRX1Q8N7U7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPRX1Q8N7U7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TPRX1Q8N7U7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPRX1Q8N7U7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TPRX1Q8N7U7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
TPRX1Q8N7U7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TPRX1Q8N7U7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TPRX1Q8N7U7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.83■■□□□ 1.09
TPRX1Q8N7U7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
TPRX1Q8N7U7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.83■■□□□ 1.08
TPRX1Q8N7U7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPRX1Q8N7U7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
TPRX1Q8N7U7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TPRX1Q8N7U7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TPRX1Q8N7U7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPRX1Q8N7U7 AC005559.1-201ENST00000589661 871 ntBASIC21.81■■□□□ 1.08
TPRX1Q8N7U7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TPRX1Q8N7U7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TPRX1Q8N7U7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TPRX1Q8N7U7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TPRX1Q8N7U7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPRX1Q8N7U7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPRX1Q8N7U7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPRX1Q8N7U7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPRX1Q8N7U7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.79■■□□□ 1.08
TPRX1Q8N7U7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPRX1Q8N7U7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPRX1Q8N7U7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPRX1Q8N7U7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPRX1Q8N7U7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPRX1Q8N7U7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TPRX1Q8N7U7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TPRX1Q8N7U7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPRX1Q8N7U7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPRX1Q8N7U7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPRX1Q8N7U7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 DUX4L28-201ENST00000623687 678 ntBASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPRX1Q8N7U7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPRX1Q8N7U7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.73■■□□□ 1.07
TPRX1Q8N7U7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPRX1Q8N7U7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.72■■□□□ 1.07
TPRX1Q8N7U7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.71■■□□□ 1.07
TPRX1Q8N7U7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.71■■□□□ 1.07
TPRX1Q8N7U7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPRX1Q8N7U7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TPRX1Q8N7U7 AL139393.2-201ENST00000608721 2025 ntBASIC21.7■■□□□ 1.06
TPRX1Q8N7U7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TPRX1Q8N7U7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPRX1Q8N7U7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPRX1Q8N7U7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
TPRX1Q8N7U7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.68■■□□□ 1.06
TPRX1Q8N7U7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms