Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ATPAF2Q8N5M1 MIR3665-201ENST00000578708 105 ntBASIC26.95■■□□□ 1.9
ATPAF2Q8N5M1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ATPAF2Q8N5M1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ATPAF2Q8N5M1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATPAF2Q8N5M1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
ATPAF2Q8N5M1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATPAF2Q8N5M1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.9■■□□□ 1.9
ATPAF2Q8N5M1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 AL162393.1-201ENST00000437852 946 ntBASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
ATPAF2Q8N5M1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
ATPAF2Q8N5M1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
ATPAF2Q8N5M1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.87■■□□□ 1.89
ATPAF2Q8N5M1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ATPAF2Q8N5M1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ATPAF2Q8N5M1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATPAF2Q8N5M1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
ATPAF2Q8N5M1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATPAF2Q8N5M1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATPAF2Q8N5M1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATPAF2Q8N5M1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATPAF2Q8N5M1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATPAF2Q8N5M1 AC087741.3-201ENST00000624270 1347 ntBASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
ATPAF2Q8N5M1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATPAF2Q8N5M1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATPAF2Q8N5M1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATPAF2Q8N5M1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.75■■□□□ 1.87
ATPAF2Q8N5M1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 AC108673.1-201ENST00000510422 1159 ntBASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATPAF2Q8N5M1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATPAF2Q8N5M1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.72■■□□□ 1.87
ATPAF2Q8N5M1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
ATPAF2Q8N5M1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
ATPAF2Q8N5M1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 AC044849.2-201ENST00000606596 710 ntBASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.7■■□□□ 1.86
ATPAF2Q8N5M1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATPAF2Q8N5M1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 MIR6090-201ENST00000622481 60 ntBASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
ATPAF2Q8N5M1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 AC127502.1-201ENST00000399971 1502 ntBASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 RPS2P35-201ENST00000443417 897 ntBASIC26.67■■□□□ 1.86
ATPAF2Q8N5M1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATPAF2Q8N5M1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATPAF2Q8N5M1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 AC139426.1-201ENST00000568218 2529 ntBASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ATPAF2Q8N5M1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATPAF2Q8N5M1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
ATPAF2Q8N5M1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATPAF2Q8N5M1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms