Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RSPO4Q2I0M5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RSPO4Q2I0M5 AL033527.3-201ENST00000566366 1196 ntBASIC26.22■■□□□ 1.79
RSPO4Q2I0M5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.2■■□□□ 1.79
RSPO4Q2I0M5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RSPO4Q2I0M5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 AC008813.1-201ENST00000536597 885 ntBASIC26.18■■□□□ 1.78
RSPO4Q2I0M5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RSPO4Q2I0M5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPO4Q2I0M5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPO4Q2I0M5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RSPO4Q2I0M5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RSPO4Q2I0M5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RSPO4Q2I0M5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.1■■□□□ 1.77
RSPO4Q2I0M5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPO4Q2I0M5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPO4Q2I0M5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RSPO4Q2I0M5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPO4Q2I0M5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RSPO4Q2I0M5 AC019069.1-201ENST00000610008 1333 ntBASIC26.04■■□□□ 1.76
RSPO4Q2I0M5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 AC022413.1-201ENST00000624602 984 ntBASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RSPO4Q2I0M5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RSPO4Q2I0M5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.01■■□□□ 1.75
RSPO4Q2I0M5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26■■□□□ 1.75
RSPO4Q2I0M5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.99■■□□□ 1.75
RSPO4Q2I0M5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RSPO4Q2I0M5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.98■■□□□ 1.75
RSPO4Q2I0M5 RARRES2P1-201ENST00000474487 481 ntBASIC25.97■■□□□ 1.75
RSPO4Q2I0M5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.97■■□□□ 1.75
RSPO4Q2I0M5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RSPO4Q2I0M5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.95■■□□□ 1.74
RSPO4Q2I0M5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RSPO4Q2I0M5 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.92■■□□□ 1.74
RSPO4Q2I0M5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.91■■□□□ 1.74
RSPO4Q2I0M5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 AL592295.1-201ENST00000400984 884 ntBASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 U85056.1-201ENST00000616429 682 ntBASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 TSPY13P-201ENST00000338964 914 ntBASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RSPO4Q2I0M5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.84■■□□□ 1.73
RSPO4Q2I0M5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms