Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AC010864.1-201ENST00000609407 1511 ntBASIC23.68■■□□□ 1.38
TNFSF11O14788 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFSF11O14788 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNFSF11O14788 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TNFSF11O14788 AC108673.1-201ENST00000510422 1159 ntBASIC23.66■■□□□ 1.38
TNFSF11O14788 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TNFSF11O14788 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TNFSF11O14788 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.65■■□□□ 1.38
TNFSF11O14788 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.65■■□□□ 1.38
TNFSF11O14788 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TNFSF11O14788 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TNFSF11O14788 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.64■■□□□ 1.38
TNFSF11O14788 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TNFSF11O14788 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TNFSF11O14788 MIR6090-201ENST00000622481 60 ntBASIC23.64■■□□□ 1.37
TNFSF11O14788 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TNFSF11O14788 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.63■■□□□ 1.37
TNFSF11O14788 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.63■■□□□ 1.37
TNFSF11O14788 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.62■■□□□ 1.37
TNFSF11O14788 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TNFSF11O14788 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TNFSF11O14788 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFSF11O14788 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFSF11O14788 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.6■■□□□ 1.37
TNFSF11O14788 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TNFSF11O14788 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TNFSF11O14788 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TNFSF11O14788 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.58■■□□□ 1.37
TNFSF11O14788 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFSF11O14788 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFSF11O14788 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFSF11O14788 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TNFSF11O14788 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFSF11O14788 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFSF11O14788 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFSF11O14788 ST7-AS1-201ENST00000456775 1889 ntBASIC23.56■■□□□ 1.36
TNFSF11O14788 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFSF11O14788 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TNFSF11O14788 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.55■■□□□ 1.36
TNFSF11O14788 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.54■■□□□ 1.36
TNFSF11O14788 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.54■■□□□ 1.36
TNFSF11O14788 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFSF11O14788 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFSF11O14788 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFSF11O14788 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFSF11O14788 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFSF11O14788 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TNFSF11O14788 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFSF11O14788 DUX4L29-201ENST00000425409 679 ntBASIC23.49■■□□□ 1.35
TNFSF11O14788 ABCB10P1-201ENST00000614297 2181 ntBASIC23.49■■□□□ 1.35
TNFSF11O14788 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFSF11O14788 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.48■■□□□ 1.35
TNFSF11O14788 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.48■■□□□ 1.35
TNFSF11O14788 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.48■■□□□ 1.35
TNFSF11O14788 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFSF11O14788 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.47■■□□□ 1.35
TNFSF11O14788 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
TNFSF11O14788 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TNFSF11O14788 AC021231.2-201ENST00000594613 730 ntBASIC23.46■■□□□ 1.35
TNFSF11O14788 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.45■■□□□ 1.34
TNFSF11O14788 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF11O14788 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TNFSF11O14788 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.44■■□□□ 1.34
TNFSF11O14788 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.44■■□□□ 1.34
TNFSF11O14788 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.43■■□□□ 1.34
TNFSF11O14788 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TNFSF11O14788 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TNFSF11O14788 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.43■■□□□ 1.34
TNFSF11O14788 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.43■■□□□ 1.34
TNFSF11O14788 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TNFSF11O14788 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.42■■□□□ 1.34
TNFSF11O14788 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF11O14788 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF11O14788 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.41■■□□□ 1.34
TNFSF11O14788 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF11O14788 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TNFSF11O14788 AC127502.1-201ENST00000399971 1502 ntBASIC23.4■■□□□ 1.34
TNFSF11O14788 ABHD17AP4-201ENST00000411545 909 ntBASIC23.4■■□□□ 1.34
TNFSF11O14788 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFSF11O14788 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.4■■□□□ 1.34
TNFSF11O14788 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TNFSF11O14788 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TNFSF11O14788 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
TNFSF11O14788 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TNFSF11O14788 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF11O14788 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF11O14788 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF11O14788 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF11O14788 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFSF11O14788 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFSF11O14788 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TNFSF11O14788 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFSF11O14788 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TNFSF11O14788 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms