Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.88□□□□□ -0.512e-6■■□□□ 14.1
PRPF8Q6P2Q9 ANXA9-202ENST00000474997 511 ntTSL 311.81□□□□□ -0.522e-6■■□□□ 14.1
PRPF8Q6P2Q9 C2-207ENST00000447952 837 ntTSL 311.72□□□□□ -0.532e-6■■□□□ 14.1
PRPF8Q6P2Q9 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.49□□□□□ -0.572e-6■■□□□ 14.1
PRPF8Q6P2Q9 PHF5A-203ENST00000491254 292 ntTSL 311.44□□□□□ -0.588e-9■■□□□ 14.1
PRPF8Q6P2Q9 C2-208ENST00000452202 539 ntTSL 411.43□□□□□ -0.582e-6■■□□□ 14.1
PRPF8Q6P2Q9 NDRG2-222ENST00000553862 745 ntTSL 211.19□□□□□ -0.622e-6■■□□□ 14.1
PRPF8Q6P2Q9 C2-216ENST00000494905 536 ntTSL 411.13□□□□□ -0.632e-6■■□□□ 14.1
PRPF8Q6P2Q9 SLC13A3-208ENST00000464518 792 ntTSL 511.12□□□□□ -0.632e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.07□□□□□ -0.642e-6■■□□□ 14.1
PRPF8Q6P2Q9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.96□□□□□ -0.652e-6■■□□□ 14.1
PRPF8Q6P2Q9 GOLGA2P10-201ENST00000550961 817 ntBASIC10.9□□□□□ -0.672e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-209ENST00000561067 469 ntTSL 410.84□□□□□ -0.672e-6■■□□□ 14.1
PRPF8Q6P2Q9 MECR-207ENST00000464915 692 ntTSL 310.47□□□□□ -0.732e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-208ENST00000560478 562 ntTSL 410.26□□□□□ -0.772e-6■■□□□ 14.1
PRPF8Q6P2Q9 KMT5C-209ENST00000587442 464 ntTSL 310.18□□□□□ -0.782e-8■■□□□ 14.1
PRPF8Q6P2Q9 CLIP2-204ENST00000474962 690 ntTSL 310.16□□□□□ -0.782e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-206ENST00000560226 580 ntTSL 29.77□□□□□ -0.852e-6■■□□□ 14.1
PRPF8Q6P2Q9 CHD7-211ENST00000532149 616 ntTSL 29.56□□□□□ -0.882e-6■■□□□ 14.1
PRPF8Q6P2Q9 NDRG2-277ENST00000557728 587 ntTSL 29.44□□□□□ -0.92e-6■■□□□ 14.1
PRPF8Q6P2Q9 KLC4-213ENST00000472172 753 ntTSL 29.39□□□□□ -0.912e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-203ENST00000558074 555 ntTSL 59.03□□□□□ -0.962e-6■■□□□ 14.1
PRPF8Q6P2Q9 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.972e-6■■□□□ 14.1
PRPF8Q6P2Q9 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -12e-6■■□□□ 14.1
PRPF8Q6P2Q9 ASAP3-207ENST00000484418 907 ntTSL 38.72□□□□□ -1.012e-6■■□□□ 14.1
PRPF8Q6P2Q9 GTPBP1-206ENST00000462332 3035 ntTSL 28.61□□□□□ -1.032e-6■■□□□ 14.1
PRPF8Q6P2Q9 NDRG2-228ENST00000554277 410 ntTSL 57.94□□□□□ -1.142e-6■■□□□ 14.1
PRPF8Q6P2Q9 NDRG2-213ENST00000449431 545 ntTSL 47.12□□□□□ -1.272e-6■■□□□ 14.1
PRPF8Q6P2Q9 E2F4-211ENST00000568693 596 ntTSL 26.71□□□□□ -1.334e-12■■□□□ 14.1
PRPF8Q6P2Q9 NDRG2-236ENST00000554531 669 ntTSL 45.64□□□□□ -1.514e-8■■□□□ 14.1
PRPF8Q6P2Q9 DAPK1-214ENST00000494010 696 ntTSL 34.53□□□□□ -1.684e-6■■□□□ 14.1
PRPF8Q6P2Q9 SAFB2-210ENST00000591310 722 ntTSL 312.27□□□□□ -0.447e-11■■□□□ 14.1
PRPF8Q6P2Q9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.88■□□□□ 0.134e-10■■□□□ 14.1
PRPF8Q6P2Q9 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)14.39□□□□□ -0.114e-10■■□□□ 14.1
PRPF8Q6P2Q9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-10■■□□□ 14.1
PRPF8Q6P2Q9 NPRL2-215ENST00000492805 786 ntTSL 211.04□□□□□ -0.642e-7■■□□□ 14.1
PRPF8Q6P2Q9 NPRL2-216ENST00000493465 462 ntTSL 37.14□□□□□ -1.272e-7■■□□□ 14.1
PRPF8Q6P2Q9 SHMT2-233ENST00000557529 1369 ntTSL 29.88□□□□□ -0.833e-7■■□□□ 14.1
PRPF8Q6P2Q9 RIPOR1-215ENST00000566730 634 ntTSL 415.55■□□□□ 0.082e-6■■□□□ 14.1
PRPF8Q6P2Q9 RIPOR1-220ENST00000569179 418 ntTSL 59.23□□□□□ -0.932e-6■■□□□ 14.1
PRPF8Q6P2Q9 SET-210ENST00000480536 388 ntTSL 23.78□□□□□ -1.82e-8■■□□□ 14.1
PRPF8Q6P2Q9 HEXDC-208ENST00000580235 638 ntTSL 317.16■□□□□ 0.349e-9■■□□□ 14.1
PRPF8Q6P2Q9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.272e-8■■□□□ 14.1
PRPF8Q6P2Q9 C1orf122-203ENST00000419397 223 ntTSL 522.15■■□□□ 1.142e-8■■□□□ 14.1
PRPF8Q6P2Q9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.992e-8■■□□□ 14.1
PRPF8Q6P2Q9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.42e-8■■□□□ 14.1
PRPF8Q6P2Q9 POLR2H-213ENST00000490958 434 ntTSL 26.55□□□□□ -1.369e-10■■□□□ 14.1
PRPF8Q6P2Q9 RABGGTB-203ENST00000459697 1177 ntTSL 24.82□□□□□ -1.641e-7■■□□□ 14.1
PRPF8Q6P2Q9 UTRN-209ENST00000455022 633 ntTSL 34.72□□□□□ -1.656e-7■■□□□ 14.1
PRPF8Q6P2Q9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.04■□□□□ -03e-6■■□□□ 14.1
PRPF8Q6P2Q9 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC9.38□□□□□ -0.913e-6■■□□□ 14.1
PRPF8Q6P2Q9 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC8.63□□□□□ -1.033e-6■■□□□ 14.1
PRPF8Q6P2Q9 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 520.99■□□□□ 0.955e-9■■□□□ 14.1
PRPF8Q6P2Q9 NAP1L4-221ENST00000534372 544 ntTSL 58.88□□□□□ -0.992e-10■■□□□ 14.1
PRPF8Q6P2Q9 NAP1L4-219ENST00000531291 572 ntTSL 56.1□□□□□ -1.432e-10■■□□□ 14.1
PRPF8Q6P2Q9 LMBR1-206ENST00000430825 1208 ntTSL 515.16■□□□□ 0.022e-7■■□□□ 14.1
PRPF8Q6P2Q9 USP47-205ENST00000525257 548 ntTSL 421.02■□□□□ 0.962e-6■■□□□ 14.1
PRPF8Q6P2Q9 C8orf82-204ENST00000532827 802 ntAPPRIS ALT2 TSL 219.93■□□□□ 0.782e-6■■□□□ 14.1
PRPF8Q6P2Q9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.55■□□□□ 0.562e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-210ENST00000432520 796 ntTSL 317.19■□□□□ 0.342e-6■■□□□ 14.1
PRPF8Q6P2Q9 NARF-221ENST00000583181 505 ntTSL 517.11■□□□□ 0.331e-17■■□□□ 14.1
PRPF8Q6P2Q9 PAN3-204ENST00000503791 2443 ntTSL 216.82■□□□□ 0.282e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-206ENST00000412355 574 ntTSL 416.12■□□□□ 0.171e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-222ENST00000488833 487 ntTSL 215.89■□□□□ 0.132e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-221ENST00000486766 579 ntTSL 415.86■□□□□ 0.131e-6■■□□□ 14.1
PRPF8Q6P2Q9 NARF-219ENST00000582585 891 ntTSL 515.58■□□□□ 0.081e-17■■□□□ 14.1
PRPF8Q6P2Q9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.022e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-209ENST00000431715 581 ntTSL 315.01□□□□□ -0.011e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-213ENST00000439812 589 ntTSL 515.01□□□□□ -0.011e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-216ENST00000455079 558 ntTSL 415.01□□□□□ -0.011e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-217ENST00000456708 576 ntTSL 415.01□□□□□ -0.011e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-218ENST00000457841 699 ntTSL 215.01□□□□□ -0.011e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-214ENST00000443140 685 ntTSL 314.86□□□□□ -0.032e-6■■□□□ 14.1
PRPF8Q6P2Q9 NBEAL2-206ENST00000461036 785 ntTSL 314.65□□□□□ -0.062e-7■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-212ENST00000436856 893 ntTSL 314.55□□□□□ -0.081e-6■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.32□□□□□ -0.122e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-207ENST00000535340 724 ntTSL 214.09□□□□□ -0.152e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-206ENST00000490736 556 ntTSL 513.89□□□□□ -0.192e-6■■□□□ 14.1
PRPF8Q6P2Q9 NARF-213ENST00000579198 599 ntTSL 513.87□□□□□ -0.191e-17■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-205ENST00000416156 1669 ntTSL 213.76□□□□□ -0.212e-6■■□□□ 14.1
PRPF8Q6P2Q9 NBEAL2-209ENST00000476095 959 ntTSL 513.72□□□□□ -0.212e-7■■□□□ 14.1
PRPF8Q6P2Q9 NBEAL2-210ENST00000477412 827 ntTSL 213.72□□□□□ -0.213e-7■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-207ENST00000428226 700 ntTSL 513.7□□□□□ -0.221e-6■■□□□ 14.1
PRPF8Q6P2Q9 MELTF-AS1-201ENST00000414354 468 ntTSL 213.56□□□□□ -0.242e-6■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-208ENST00000477564 2096 ntTSL 213.3□□□□□ -0.282e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.04□□□□□ -0.322e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.94□□□□□ -0.342e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.94□□□□□ -0.342e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-211ENST00000540917 551 ntTSL 412.94□□□□□ -0.342e-6■■□□□ 14.1
PRPF8Q6P2Q9 TMEM14B-219ENST00000492297 559 ntTSL 212.93□□□□□ -0.342e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-211ENST00000434939 568 ntTSL 412.81□□□□□ -0.362e-6■■□□□ 14.1
PRPF8Q6P2Q9 CTSB-203ENST00000420692 2230 ntTSL 212.44□□□□□ -0.422e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-204ENST00000396196 1354 ntTSL 212.29□□□□□ -0.442e-6■■□□□ 14.1
PRPF8Q6P2Q9 ACADM-204ENST00000473018 579 ntTSL 212.28□□□□□ -0.442e-6■■□□□ 14.1
PRPF8Q6P2Q9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.452e-6■■□□□ 14.1
PRPF8Q6P2Q9 ACADM-216ENST00000534146 654 ntTSL 412.25□□□□□ -0.452e-6■■□□□ 14.1
PRPF8Q6P2Q9 CTSB-218ENST00000530624 430 ntTSL 512.23□□□□□ -0.452e-6■■□□□ 14.1
PRPF8Q6P2Q9 BAGE2-201ENST00000470054 1891 ntTSL 1 (best)12.22□□□□□ -0.452e-6■■□□□ 14.1
PRPF8Q6P2Q9 ATG9A-219ENST00000466217 594 ntTSL 212.17□□□□□ -0.461e-6■■□□□ 14.1
PRPF8Q6P2Q9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.492e-6■■□□□ 14.1
Retrieved 100 of 73,762 protein–RNA pairs in 1838.5 ms