RNA–Protein interactions for RNA: ENST00000436856.5

ATG9A-212, Transcript of autophagy related 9A, humanhuman

TSL 3

Gene ATG9A, Length 893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-212ENST00000436856 NISCHQ9Y2I1 1504 aa41.99■■■■■ 4.31
ATG9A-212ENST00000436856 CCDC180Q9P1Z9 1646 aa37.41■■■■□ 3.58
ATG9A-212ENST00000436856 ABCC9O60706 1549 aa37.03■■■■□ 3.52
ATG9A-212ENST00000436856 DCAF8L2P0C7V8 631 aa35.42■■■■□ 3.26
ATG9A-212ENST00000436856 RB1CC1Q8TDY2 1594 aa35.39■■■■□ 3.26
ATG9A-212ENST00000436856 NACADO15069 1562 aa35.24■■■■□ 3.23
ATG9A-212ENST00000436856 ZCCHC6Q5VYS8 1495 aaKnown RBP34.92■■■■□ 3.18
ATG9A-212ENST00000436856 MYO15BQ96JP2 1530 aa34.84■■■■□ 3.17
ATG9A-212ENST00000436856 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
ATG9A-212ENST00000436856 PABPN1Q86U42 306 aaKnown RBP eCLIP34.59■■■■□ 3.13
ATG9A-212ENST00000436856 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
ATG9A-212ENST00000436856 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.08
ATG9A-212ENST00000436856 SCRIBQ14160 1630 aa34.27■■■■□ 3.08
ATG9A-212ENST00000436856 DNAJC5BQ9UF47 199 aa34.18■■■■□ 3.06
ATG9A-212ENST00000436856 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3.01
ATG9A-212ENST00000436856 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
ATG9A-212ENST00000436856 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
ATG9A-212ENST00000436856 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
ATG9A-212ENST00000436856 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
ATG9A-212ENST00000436856 BAZ1AQ9NRL2 1556 aaPredicted RBP32.57■■■□□ 2.8
ATG9A-212ENST00000436856 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
ATG9A-212ENST00000436856 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
ATG9A-212ENST00000436856 SMARCA2P51531 1590 aa32.48■■■□□ 2.79
ATG9A-212ENST00000436856 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
ATG9A-212ENST00000436856 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
ATG9A-212ENST00000436856 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
ATG9A-212ENST00000436856 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
ATG9A-212ENST00000436856 WIZO95785 1651 aa32.07■■■□□ 2.72
ATG9A-212ENST00000436856 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
ATG9A-212ENST00000436856 NESP48681 1621 aa31.94■■■□□ 2.7
ATG9A-212ENST00000436856 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
ATG9A-212ENST00000436856 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
ATG9A-212ENST00000436856 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
ATG9A-212ENST00000436856 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
ATG9A-212ENST00000436856 CUX2O14529 1486 aa31.58■■■□□ 2.65
ATG9A-212ENST00000436856 PDS5BQ9NTI5 1447 aa31.55■■■□□ 2.64
ATG9A-212ENST00000436856 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
ATG9A-212ENST00000436856 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
ATG9A-212ENST00000436856 CFTRP13569 1480 aa31.33■■■□□ 2.61
ATG9A-212ENST00000436856 CCDC88BA6NC98 1476 aa31.31■■■□□ 2.6
ATG9A-212ENST00000436856 FANCD2Q9BXW9 1451 aa31.28■■■□□ 2.6
ATG9A-212ENST00000436856 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
ATG9A-212ENST00000436856 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
ATG9A-212ENST00000436856 WDR62O43379 1518 aa31.14■■■□□ 2.57
ATG9A-212ENST00000436856 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
ATG9A-212ENST00000436856 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
ATG9A-212ENST00000436856 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
ATG9A-212ENST00000436856 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
ATG9A-212ENST00000436856 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
ATG9A-212ENST00000436856 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
ATG9A-212ENST00000436856 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
ATG9A-212ENST00000436856 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
ATG9A-212ENST00000436856 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
ATG9A-212ENST00000436856 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
ATG9A-212ENST00000436856 CUX1P39880 1505 aa30.42■■■□□ 2.46
ATG9A-212ENST00000436856 EIF4G3O43432 1585 aaKnown RBP30.39■■■□□ 2.46
ATG9A-212ENST00000436856 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
ATG9A-212ENST00000436856 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
ATG9A-212ENST00000436856 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
ATG9A-212ENST00000436856 SOGA1O94964 1423 aa30.34■■■□□ 2.45
ATG9A-212ENST00000436856 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.451e-7■■■■■ 36.4
ATG9A-212ENST00000436856 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
ATG9A-212ENST00000436856 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
ATG9A-212ENST00000436856 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
ATG9A-212ENST00000436856 FBLN2P98095 1184 aa30.12■■■□□ 2.41
ATG9A-212ENST00000436856 SYNJ1O43426 1573 aa30.08■■■□□ 2.41
ATG9A-212ENST00000436856 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
ATG9A-212ENST00000436856 CHD1O14646 1710 aa30.06■■■□□ 2.4
ATG9A-212ENST00000436856 SNAPC4Q5SXM2 1469 aa30.05■■■□□ 2.4
ATG9A-212ENST00000436856 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
ATG9A-212ENST00000436856 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
ATG9A-212ENST00000436856 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
ATG9A-212ENST00000436856 GRIN2BQ13224 1484 aa30■■■□□ 2.39
ATG9A-212ENST00000436856 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
ATG9A-212ENST00000436856 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
ATG9A-212ENST00000436856 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
ATG9A-212ENST00000436856 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
ATG9A-212ENST00000436856 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
ATG9A-212ENST00000436856 CHMP7Q8WUX9 453 aaPredicted RBP29.91■■■□□ 2.38
ATG9A-212ENST00000436856 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
ATG9A-212ENST00000436856 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
ATG9A-212ENST00000436856 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
ATG9A-212ENST00000436856 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
ATG9A-212ENST00000436856 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
ATG9A-212ENST00000436856 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
ATG9A-212ENST00000436856 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
ATG9A-212ENST00000436856 ERICH3Q5RHP9 1530 aa29.63■■■□□ 2.33
ATG9A-212ENST00000436856 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
ATG9A-212ENST00000436856 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
ATG9A-212ENST00000436856 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
ATG9A-212ENST00000436856 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
ATG9A-212ENST00000436856 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
ATG9A-212ENST00000436856 CEP170Q5SW79 1584 aa29.5■■■□□ 2.31
ATG9A-212ENST00000436856 NUP160Q12769 1436 aa29.45■■■□□ 2.31
ATG9A-212ENST00000436856 IGF1RP08069 1367 aa29.39■■■□□ 2.3
ATG9A-212ENST00000436856 CUL7Q14999 1698 aa29.33■■■□□ 2.29
ATG9A-212ENST00000436856 ERCC6L2Q5T890 1561 aa29.32■■■□□ 2.28
ATG9A-212ENST00000436856 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
ATG9A-212ENST00000436856 SHROOM2Q13796 1616 aa29.25■■■□□ 2.27
ATG9A-212ENST00000436856 CARMIL1Q5VZK9 1371 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms