RNA–Protein interactions for RNA: ENST00000432520.5

ATG9A-210, Transcript of autophagy related 9A, humanhuman

TSL 3

Gene ATG9A, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-210ENST00000432520 NISCHQ9Y2I1 1504 aa49.52■■■■■ 5.52
ATG9A-210ENST00000432520 CCDC180Q9P1Z9 1646 aa44.26■■■■■ 4.68
ATG9A-210ENST00000432520 ABCC9O60706 1549 aa43.82■■■■■ 4.61
ATG9A-210ENST00000432520 RB1CC1Q8TDY2 1594 aa41.96■■■■■ 4.31
ATG9A-210ENST00000432520 NACADO15069 1562 aa41.77■■■■■ 4.28
ATG9A-210ENST00000432520 DCAF8L2P0C7V8 631 aa41.75■■■■■ 4.27
ATG9A-210ENST00000432520 MYO15BQ96JP2 1530 aa41.32■■■■■ 4.2
ATG9A-210ENST00000432520 ZCCHC6Q5VYS8 1495 aaKnown RBP41.12■■■■■ 4.17
ATG9A-210ENST00000432520 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
ATG9A-210ENST00000432520 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
ATG9A-210ENST00000432520 PABPN1Q86U42 306 aaKnown RBP eCLIP40.88■■■■■ 4.13
ATG9A-210ENST00000432520 DNAJC5BQ9UF47 199 aa40.61■■■■■ 4.09
ATG9A-210ENST00000432520 BICRAQ9NZM4 1560 aa40.58■■■■■ 4.09
ATG9A-210ENST00000432520 SCRIBQ14160 1630 aa40.35■■■■■ 4.05
ATG9A-210ENST00000432520 SHROOM4Q9ULL8 1493 aa40.21■■■■■ 4.03
ATG9A-210ENST00000432520 EIF4G1Q04637 1599 aaKnown RBP39.63■■■■□ 3.93
ATG9A-210ENST00000432520 CC2D2AQ9P2K1 1620 aa39.59■■■■□ 3.93
ATG9A-210ENST00000432520 CECR2Q9BXF3 1484 aa39.44■■■■□ 3.9
ATG9A-210ENST00000432520 SMARCA4P51532 1647 aa38.53■■■■□ 3.76
ATG9A-210ENST00000432520 NCAPD3P42695 1498 aa38.52■■■■□ 3.76
ATG9A-210ENST00000432520 ATAD2BQ9ULI0 1458 aa38.46■■■■□ 3.75
ATG9A-210ENST00000432520 BAZ1AQ9NRL2 1556 aaPredicted RBP38.45■■■■□ 3.75
ATG9A-210ENST00000432520 SMARCA2P51531 1590 aa38.44■■■■□ 3.74
ATG9A-210ENST00000432520 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
ATG9A-210ENST00000432520 BAZ1BQ9UIG0 1483 aaKnown RBP38.16■■■■□ 3.7
ATG9A-210ENST00000432520 PEG3Q9GZU2 1588 aa38.14■■■■□ 3.7
ATG9A-210ENST00000432520 MROH2BQ7Z745 1585 aa38.13■■■■□ 3.69
ATG9A-210ENST00000432520 ERCC6Q03468 1493 aa37.89■■■■□ 3.66
ATG9A-210ENST00000432520 NESP48681 1621 aa37.72■■■■□ 3.63
ATG9A-210ENST00000432520 WIZO95785 1651 aa37.71■■■■□ 3.63
ATG9A-210ENST00000432520 CUX2O14529 1486 aa37.62■■■■□ 3.61
ATG9A-210ENST00000432520 LAMC3Q9Y6N6 1575 aa37.62■■■■□ 3.61
ATG9A-210ENST00000432520 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
ATG9A-210ENST00000432520 PDS5BQ9NTI5 1447 aa37.44■■■■□ 3.58
ATG9A-210ENST00000432520 CADPSQ9ULU8 1353 aa37.41■■■■□ 3.58
ATG9A-210ENST00000432520 TOP2AP11388 1531 aaKnown RBP37.3■■■■□ 3.56
ATG9A-210ENST00000432520 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
ATG9A-210ENST00000432520 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
ATG9A-210ENST00000432520 DNAJC5Q9H3Z4 198 aa37.07■■■■□ 3.52
ATG9A-210ENST00000432520 CFTRP13569 1480 aa37.04■■■■□ 3.52
ATG9A-210ENST00000432520 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
ATG9A-210ENST00000432520 CEP164Q9UPV0 1460 aa37■■■■□ 3.51
ATG9A-210ENST00000432520 FANCD2Q9BXW9 1451 aa36.97■■■■□ 3.51
ATG9A-210ENST00000432520 WDR62O43379 1518 aa36.89■■■■□ 3.5
ATG9A-210ENST00000432520 CCDC88BA6NC98 1476 aa36.86■■■■□ 3.49
ATG9A-210ENST00000432520 PRDM2Q13029 1718 aa36.72■■■■□ 3.47
ATG9A-210ENST00000432520 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
ATG9A-210ENST00000432520 ABCC8Q09428 1581 aa36.35■■■■□ 3.41
ATG9A-210ENST00000432520 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
ATG9A-210ENST00000432520 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
ATG9A-210ENST00000432520 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
ATG9A-210ENST00000432520 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
ATG9A-210ENST00000432520 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
ATG9A-210ENST00000432520 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
ATG9A-210ENST00000432520 POLA1P09884 1462 aaPredicted RBP35.95■■■■□ 3.35
ATG9A-210ENST00000432520 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
ATG9A-210ENST00000432520 EIF4G3O43432 1585 aaKnown RBP35.9■■■■□ 3.34
ATG9A-210ENST00000432520 SOGA1O94964 1423 aa35.85■■■■□ 3.33
ATG9A-210ENST00000432520 AQRO60306 1485 aaKnown RBP eCLIP35.82■■■■□ 3.322e-7■■■■■ 36.4
ATG9A-210ENST00000432520 CUX1P39880 1505 aa35.81■■■■□ 3.32
ATG9A-210ENST00000432520 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
ATG9A-210ENST00000432520 RAD54L2Q9Y4B4 1467 aa35.8■■■■□ 3.32
ATG9A-210ENST00000432520 TDRD9Q8NDG6 1382 aaKnown RBP35.69■■■■□ 3.3
ATG9A-210ENST00000432520 TRIM41Q8WV44 630 aa35.69■■■■□ 3.3
ATG9A-210ENST00000432520 WDR97A6NE52 1622 aa35.66■■■■□ 3.3
ATG9A-210ENST00000432520 FBLN2P98095 1184 aa35.61■■■■□ 3.29
ATG9A-210ENST00000432520 CHD1O14646 1710 aa35.55■■■■□ 3.28
ATG9A-210ENST00000432520 GRIN2BQ13224 1484 aa35.48■■■■□ 3.27
ATG9A-210ENST00000432520 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
ATG9A-210ENST00000432520 WRNQ14191 1432 aaPredicted RBP eCLIP35.46■■■■□ 3.27
ATG9A-210ENST00000432520 MAGI1Q96QZ7 1491 aaPredicted RBP35.44■■■■□ 3.26
ATG9A-210ENST00000432520 CHMP7Q8WUX9 453 aaPredicted RBP35.43■■■■□ 3.26
ATG9A-210ENST00000432520 ABCA10Q8WWZ4 1543 aa35.42■■■■□ 3.26
ATG9A-210ENST00000432520 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
ATG9A-210ENST00000432520 RIMBP3CA6NJZ7 1639 aa35.41■■■■□ 3.26
ATG9A-210ENST00000432520 RIMBP3BA6NNM3 1639 aa35.41■■■■□ 3.26
ATG9A-210ENST00000432520 RIMBP3Q9UFD9 1639 aa35.41■■■■□ 3.26
ATG9A-210ENST00000432520 TOP2BQ02880 1626 aa35.39■■■■□ 3.26
ATG9A-210ENST00000432520 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
ATG9A-210ENST00000432520 ARHGEF11O15085 1522 aa35.36■■■■□ 3.25
ATG9A-210ENST00000432520 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
ATG9A-210ENST00000432520 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
ATG9A-210ENST00000432520 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
ATG9A-210ENST00000432520 ABCA5Q8WWZ7 1642 aa35.3■■■■□ 3.24
ATG9A-210ENST00000432520 CYB5RLQ6IPT4 315 aa35.15■■■■□ 3.22
ATG9A-210ENST00000432520 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
ATG9A-210ENST00000432520 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.2
ATG9A-210ENST00000432520 ADAMTS12P58397 1594 aa35.01■■■■□ 3.2
ATG9A-210ENST00000432520 ARAP1Q96P48 1450 aa35.01■■■■□ 3.19
ATG9A-210ENST00000432520 GRIN2AQ12879 1464 aa35■■■■□ 3.19
ATG9A-210ENST00000432520 FHAD1B1AJZ9 1412 aa34.99■■■■□ 3.19
ATG9A-210ENST00000432520 NUP160Q12769 1436 aa34.84■■■■□ 3.17
ATG9A-210ENST00000432520 CEP170Q5SW79 1584 aa34.81■■■■□ 3.16
ATG9A-210ENST00000432520 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
ATG9A-210ENST00000432520 TRHP20396 242 aaPredicted RBP34.67■■■■□ 3.14
ATG9A-210ENST00000432520 IGF1RP08069 1367 aa34.65■■■■□ 3.14
ATG9A-210ENST00000432520 SHROOM2Q13796 1616 aa34.62■■■■□ 3.13
ATG9A-210ENST00000432520 CUL7Q14999 1698 aa34.61■■■■□ 3.13
ATG9A-210ENST00000432520 ERCC6L2Q5T890 1561 aa34.57■■■■□ 3.13
ATG9A-210ENST00000432520 JPH4Q96JJ6 628 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms