RNA–Protein interactions for RNA: ENST00000455079.5

ATG9A-216, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-216ENST00000455079 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
ATG9A-216ENST00000455079 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
ATG9A-216ENST00000455079 ABCC9O60706 1549 aa37.65■■■■□ 3.62
ATG9A-216ENST00000455079 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
ATG9A-216ENST00000455079 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
ATG9A-216ENST00000455079 NACADO15069 1562 aa36.06■■■■□ 3.36
ATG9A-216ENST00000455079 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
ATG9A-216ENST00000455079 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
ATG9A-216ENST00000455079 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
ATG9A-216ENST00000455079 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
ATG9A-216ENST00000455079 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
ATG9A-216ENST00000455079 BICRAQ9NZM4 1560 aa35.08■■■■□ 3.21
ATG9A-216ENST00000455079 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
ATG9A-216ENST00000455079 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
ATG9A-216ENST00000455079 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
ATG9A-216ENST00000455079 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
ATG9A-216ENST00000455079 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
ATG9A-216ENST00000455079 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
ATG9A-216ENST00000455079 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
ATG9A-216ENST00000455079 BAZ1AQ9NRL2 1556 aaPredicted RBP33.4■■■□□ 2.94
ATG9A-216ENST00000455079 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
ATG9A-216ENST00000455079 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
ATG9A-216ENST00000455079 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
ATG9A-216ENST00000455079 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
ATG9A-216ENST00000455079 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
ATG9A-216ENST00000455079 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
ATG9A-216ENST00000455079 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
ATG9A-216ENST00000455079 WIZO95785 1651 aa32.91■■■□□ 2.86
ATG9A-216ENST00000455079 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
ATG9A-216ENST00000455079 NESP48681 1621 aa32.57■■■□□ 2.8
ATG9A-216ENST00000455079 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
ATG9A-216ENST00000455079 ERCC6Q03468 1493 aa32.43■■■□□ 2.78
ATG9A-216ENST00000455079 LAMC3Q9Y6N6 1575 aa32.42■■■□□ 2.78
ATG9A-216ENST00000455079 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
ATG9A-216ENST00000455079 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
ATG9A-216ENST00000455079 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
ATG9A-216ENST00000455079 CCDC88BA6NC98 1476 aa32.15■■■□□ 2.74
ATG9A-216ENST00000455079 DNAJC5Q9H3Z4 198 aa32.11■■■□□ 2.73
ATG9A-216ENST00000455079 CFTRP13569 1480 aa32.1■■■□□ 2.73
ATG9A-216ENST00000455079 CUX2O14529 1486 aa32.09■■■□□ 2.73
ATG9A-216ENST00000455079 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
ATG9A-216ENST00000455079 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
ATG9A-216ENST00000455079 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
ATG9A-216ENST00000455079 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
ATG9A-216ENST00000455079 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
ATG9A-216ENST00000455079 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
ATG9A-216ENST00000455079 WDR62O43379 1518 aa31.78■■■□□ 2.68
ATG9A-216ENST00000455079 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
ATG9A-216ENST00000455079 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
ATG9A-216ENST00000455079 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
ATG9A-216ENST00000455079 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
ATG9A-216ENST00000455079 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
ATG9A-216ENST00000455079 CUX1P39880 1505 aa31.19■■■□□ 2.58
ATG9A-216ENST00000455079 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
ATG9A-216ENST00000455079 ZNF608Q9ULD9 1512 aaPredicted RBP31.14■■■□□ 2.58
ATG9A-216ENST00000455079 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
ATG9A-216ENST00000455079 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
ATG9A-216ENST00000455079 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
ATG9A-216ENST00000455079 SOGA1O94964 1423 aa31.05■■■□□ 2.56
ATG9A-216ENST00000455079 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
ATG9A-216ENST00000455079 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.552e-7■■■■■ 36.4
ATG9A-216ENST00000455079 WRNQ14191 1432 aaPredicted RBP eCLIP30.94■■■□□ 2.54
ATG9A-216ENST00000455079 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
ATG9A-216ENST00000455079 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
ATG9A-216ENST00000455079 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
ATG9A-216ENST00000455079 TOP2BQ02880 1626 aa30.88■■■□□ 2.53
ATG9A-216ENST00000455079 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
ATG9A-216ENST00000455079 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
ATG9A-216ENST00000455079 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
ATG9A-216ENST00000455079 CHD1O14646 1710 aa30.69■■■□□ 2.5
ATG9A-216ENST00000455079 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
ATG9A-216ENST00000455079 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
ATG9A-216ENST00000455079 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
ATG9A-216ENST00000455079 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
ATG9A-216ENST00000455079 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
ATG9A-216ENST00000455079 FBLN2P98095 1184 aa30.63■■■□□ 2.49
ATG9A-216ENST00000455079 MAGI1Q96QZ7 1491 aaPredicted RBP30.58■■■□□ 2.49
ATG9A-216ENST00000455079 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
ATG9A-216ENST00000455079 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
ATG9A-216ENST00000455079 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
ATG9A-216ENST00000455079 ERICH3Q5RHP9 1530 aa30.38■■■□□ 2.45
ATG9A-216ENST00000455079 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
ATG9A-216ENST00000455079 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
ATG9A-216ENST00000455079 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
ATG9A-216ENST00000455079 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
ATG9A-216ENST00000455079 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
ATG9A-216ENST00000455079 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
ATG9A-216ENST00000455079 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
ATG9A-216ENST00000455079 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
ATG9A-216ENST00000455079 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
ATG9A-216ENST00000455079 IGF1RP08069 1367 aa30.2■■■□□ 2.43
ATG9A-216ENST00000455079 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
ATG9A-216ENST00000455079 NUP160Q12769 1436 aa30.14■■■□□ 2.42
ATG9A-216ENST00000455079 CUL7Q14999 1698 aa30.11■■■□□ 2.41
ATG9A-216ENST00000455079 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
ATG9A-216ENST00000455079 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
ATG9A-216ENST00000455079 ARAP1Q96P48 1450 aa30.04■■■□□ 2.4
ATG9A-216ENST00000455079 CARMIL1Q5VZK9 1371 aa30.02■■■□□ 2.4
ATG9A-216ENST00000455079 SHROOM2Q13796 1616 aa29.94■■■□□ 2.38
ATG9A-216ENST00000455079 ERCC6L2Q5T890 1561 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms