RNA–Protein interactions for RNA: ENST00000434939.1

ATG9A-211, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-211ENST00000434939 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
ATG9A-211ENST00000434939 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
ATG9A-211ENST00000434939 ABCC9O60706 1549 aa32.88■■■□□ 2.85
ATG9A-211ENST00000434939 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
ATG9A-211ENST00000434939 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
ATG9A-211ENST00000434939 NACADO15069 1562 aa31.21■■■□□ 2.59
ATG9A-211ENST00000434939 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
ATG9A-211ENST00000434939 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
ATG9A-211ENST00000434939 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
ATG9A-211ENST00000434939 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
ATG9A-211ENST00000434939 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
ATG9A-211ENST00000434939 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
ATG9A-211ENST00000434939 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
ATG9A-211ENST00000434939 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
ATG9A-211ENST00000434939 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
ATG9A-211ENST00000434939 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
ATG9A-211ENST00000434939 CC2D2AQ9P2K1 1620 aa29.64■■■□□ 2.34
ATG9A-211ENST00000434939 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
ATG9A-211ENST00000434939 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
ATG9A-211ENST00000434939 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
ATG9A-211ENST00000434939 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
ATG9A-211ENST00000434939 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
ATG9A-211ENST00000434939 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
ATG9A-211ENST00000434939 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
ATG9A-211ENST00000434939 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
ATG9A-211ENST00000434939 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
ATG9A-211ENST00000434939 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
ATG9A-211ENST00000434939 WIZO95785 1651 aa28.37■■■□□ 2.13
ATG9A-211ENST00000434939 NESP48681 1621 aa28.36■■■□□ 2.13
ATG9A-211ENST00000434939 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
ATG9A-211ENST00000434939 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
ATG9A-211ENST00000434939 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
ATG9A-211ENST00000434939 CUX2O14529 1486 aa28.03■■■□□ 2.08
ATG9A-211ENST00000434939 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
ATG9A-211ENST00000434939 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
ATG9A-211ENST00000434939 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
ATG9A-211ENST00000434939 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
ATG9A-211ENST00000434939 THOC2Q8NI27 1593 aaKnown RBP27.87■■■□□ 2.05
ATG9A-211ENST00000434939 CFTRP13569 1480 aa27.75■■■□□ 2.03
ATG9A-211ENST00000434939 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
ATG9A-211ENST00000434939 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
ATG9A-211ENST00000434939 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
ATG9A-211ENST00000434939 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
ATG9A-211ENST00000434939 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
ATG9A-211ENST00000434939 WDR62O43379 1518 aa27.58■■■□□ 2.01
ATG9A-211ENST00000434939 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
ATG9A-211ENST00000434939 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
ATG9A-211ENST00000434939 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
ATG9A-211ENST00000434939 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
ATG9A-211ENST00000434939 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
ATG9A-211ENST00000434939 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
ATG9A-211ENST00000434939 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
ATG9A-211ENST00000434939 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
ATG9A-211ENST00000434939 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
ATG9A-211ENST00000434939 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
ATG9A-211ENST00000434939 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
ATG9A-211ENST00000434939 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.92e-7■■■■■ 36.4
ATG9A-211ENST00000434939 CUX1P39880 1505 aa26.91■■□□□ 1.9
ATG9A-211ENST00000434939 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
ATG9A-211ENST00000434939 SOGA1O94964 1423 aa26.9■■□□□ 1.9
ATG9A-211ENST00000434939 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
ATG9A-211ENST00000434939 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
ATG9A-211ENST00000434939 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
ATG9A-211ENST00000434939 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
ATG9A-211ENST00000434939 FBLN2P98095 1184 aa26.75■■□□□ 1.87
ATG9A-211ENST00000434939 CHD1O14646 1710 aa26.63■■□□□ 1.85
ATG9A-211ENST00000434939 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
ATG9A-211ENST00000434939 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
ATG9A-211ENST00000434939 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
ATG9A-211ENST00000434939 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
ATG9A-211ENST00000434939 GRIN2BQ13224 1484 aa26.56■■□□□ 1.84
ATG9A-211ENST00000434939 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
ATG9A-211ENST00000434939 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
ATG9A-211ENST00000434939 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
ATG9A-211ENST00000434939 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
ATG9A-211ENST00000434939 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
ATG9A-211ENST00000434939 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
ATG9A-211ENST00000434939 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
ATG9A-211ENST00000434939 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
ATG9A-211ENST00000434939 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
ATG9A-211ENST00000434939 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
ATG9A-211ENST00000434939 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.82
ATG9A-211ENST00000434939 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
ATG9A-211ENST00000434939 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
ATG9A-211ENST00000434939 CYB5RLQ6IPT4 315 aa26.36■■□□□ 1.81
ATG9A-211ENST00000434939 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
ATG9A-211ENST00000434939 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
ATG9A-211ENST00000434939 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
ATG9A-211ENST00000434939 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
ATG9A-211ENST00000434939 FHAD1B1AJZ9 1412 aa26.21■■□□□ 1.79
ATG9A-211ENST00000434939 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
ATG9A-211ENST00000434939 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
ATG9A-211ENST00000434939 NUP160Q12769 1436 aa26.1■■□□□ 1.77
ATG9A-211ENST00000434939 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
ATG9A-211ENST00000434939 IGF1RP08069 1367 aa26.06■■□□□ 1.76
ATG9A-211ENST00000434939 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
ATG9A-211ENST00000434939 TRHP20396 242 aaPredicted RBP25.97■■□□□ 1.75
ATG9A-211ENST00000434939 JPH4Q96JJ6 628 aa25.94■■□□□ 1.74
ATG9A-211ENST00000434939 SHROOM2Q13796 1616 aa25.9■■□□□ 1.74
ATG9A-211ENST00000434939 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
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