RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
ATG9A-219ENST00000466217 ABCC9O60706 1549 aa31.61■■■□□ 2.65
ATG9A-219ENST00000466217 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
ATG9A-219ENST00000466217 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
ATG9A-219ENST00000466217 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
ATG9A-219ENST00000466217 NACADO15069 1562 aa29.82■■■□□ 2.36
ATG9A-219ENST00000466217 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
ATG9A-219ENST00000466217 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
ATG9A-219ENST00000466217 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
ATG9A-219ENST00000466217 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
ATG9A-219ENST00000466217 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
ATG9A-219ENST00000466217 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
ATG9A-219ENST00000466217 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
ATG9A-219ENST00000466217 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
ATG9A-219ENST00000466217 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
ATG9A-219ENST00000466217 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
ATG9A-219ENST00000466217 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
ATG9A-219ENST00000466217 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
ATG9A-219ENST00000466217 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
ATG9A-219ENST00000466217 NCAPD3P42695 1498 aa27.54■■■□□ 2
ATG9A-219ENST00000466217 CUX2O14529 1486 aa27.44■■□□□ 1.98
ATG9A-219ENST00000466217 ATAD2BQ9ULI0 1458 aa27.39■■□□□ 1.98
ATG9A-219ENST00000466217 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
ATG9A-219ENST00000466217 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
ATG9A-219ENST00000466217 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ATG9A-219ENST00000466217 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
ATG9A-219ENST00000466217 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
ATG9A-219ENST00000466217 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
ATG9A-219ENST00000466217 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
ATG9A-219ENST00000466217 NESP48681 1621 aa27.08■■□□□ 1.93
ATG9A-219ENST00000466217 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
ATG9A-219ENST00000466217 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
ATG9A-219ENST00000466217 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
ATG9A-219ENST00000466217 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
ATG9A-219ENST00000466217 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
ATG9A-219ENST00000466217 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
ATG9A-219ENST00000466217 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
ATG9A-219ENST00000466217 WDR62O43379 1518 aa26.52■■□□□ 1.84
ATG9A-219ENST00000466217 WIZO95785 1651 aa26.51■■□□□ 1.83
ATG9A-219ENST00000466217 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
ATG9A-219ENST00000466217 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
ATG9A-219ENST00000466217 CFTRP13569 1480 aa26.33■■□□□ 1.81
ATG9A-219ENST00000466217 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
ATG9A-219ENST00000466217 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
ATG9A-219ENST00000466217 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
ATG9A-219ENST00000466217 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
ATG9A-219ENST00000466217 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
ATG9A-219ENST00000466217 PRDM2Q13029 1718 aa26■■□□□ 1.75
ATG9A-219ENST00000466217 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
ATG9A-219ENST00000466217 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
ATG9A-219ENST00000466217 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
ATG9A-219ENST00000466217 TOPBP1Q92547 1522 aa25.82■■□□□ 1.72
ATG9A-219ENST00000466217 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
ATG9A-219ENST00000466217 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
ATG9A-219ENST00000466217 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
ATG9A-219ENST00000466217 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
ATG9A-219ENST00000466217 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
ATG9A-219ENST00000466217 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
ATG9A-219ENST00000466217 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
ATG9A-219ENST00000466217 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
ATG9A-219ENST00000466217 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.682e-7■■■■■ 36.4
ATG9A-219ENST00000466217 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
ATG9A-219ENST00000466217 CHD1O14646 1710 aa25.51■■□□□ 1.67
ATG9A-219ENST00000466217 CYB5RLQ6IPT4 315 aa25.46■■□□□ 1.67
ATG9A-219ENST00000466217 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
ATG9A-219ENST00000466217 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
ATG9A-219ENST00000466217 SOGA1O94964 1423 aa25.41■■□□□ 1.66
ATG9A-219ENST00000466217 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
ATG9A-219ENST00000466217 FBLN2P98095 1184 aa25.4■■□□□ 1.66
ATG9A-219ENST00000466217 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
ATG9A-219ENST00000466217 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
ATG9A-219ENST00000466217 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
ATG9A-219ENST00000466217 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
ATG9A-219ENST00000466217 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
ATG9A-219ENST00000466217 CUX1P39880 1505 aa25.27■■□□□ 1.64
ATG9A-219ENST00000466217 GRIN2BQ13224 1484 aa25.24■■□□□ 1.63
ATG9A-219ENST00000466217 TRHP20396 242 aaPredicted RBP25.24■■□□□ 1.63
ATG9A-219ENST00000466217 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
ATG9A-219ENST00000466217 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
ATG9A-219ENST00000466217 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
ATG9A-219ENST00000466217 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
ATG9A-219ENST00000466217 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
ATG9A-219ENST00000466217 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
ATG9A-219ENST00000466217 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
ATG9A-219ENST00000466217 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
ATG9A-219ENST00000466217 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
ATG9A-219ENST00000466217 NUP160Q12769 1436 aa24.86■■□□□ 1.57
ATG9A-219ENST00000466217 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
ATG9A-219ENST00000466217 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
ATG9A-219ENST00000466217 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.56
ATG9A-219ENST00000466217 CEP170Q5SW79 1584 aa24.81■■□□□ 1.56
ATG9A-219ENST00000466217 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
ATG9A-219ENST00000466217 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
ATG9A-219ENST00000466217 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
ATG9A-219ENST00000466217 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
ATG9A-219ENST00000466217 SHROOM2Q13796 1616 aa24.76■■□□□ 1.55
ATG9A-219ENST00000466217 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
ATG9A-219ENST00000466217 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
ATG9A-219ENST00000466217 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
ATG9A-219ENST00000466217 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms