RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 NISCHQ9Y2I1 1504 aa45.55■■■■■ 4.88
ATG9A-221ENST00000486766 CCDC180Q9P1Z9 1646 aa40.41■■■■■ 4.06
ATG9A-221ENST00000486766 ABCC9O60706 1549 aa39.07■■■■□ 3.84
ATG9A-221ENST00000486766 ZCCHC6Q5VYS8 1495 aaKnown RBP38.04■■■■□ 3.68
ATG9A-221ENST00000486766 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
ATG9A-221ENST00000486766 NACADO15069 1562 aa37.82■■■■□ 3.65
ATG9A-221ENST00000486766 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
ATG9A-221ENST00000486766 DCAF1Q9Y4B6 1507 aa37.69■■■■□ 3.62
ATG9A-221ENST00000486766 MYO15BQ96JP2 1530 aa37.67■■■■□ 3.62
ATG9A-221ENST00000486766 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
ATG9A-221ENST00000486766 SCRIBQ14160 1630 aa36.91■■■■□ 3.5
ATG9A-221ENST00000486766 BICRAQ9NZM4 1560 aa36.6■■■■□ 3.45
ATG9A-221ENST00000486766 PABPN1Q86U42 306 aaKnown RBP eCLIP36.53■■■■□ 3.44
ATG9A-221ENST00000486766 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
ATG9A-221ENST00000486766 EIF4G1Q04637 1599 aaKnown RBP35.62■■■■□ 3.29
ATG9A-221ENST00000486766 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
ATG9A-221ENST00000486766 CC2D2AQ9P2K1 1620 aa35.39■■■■□ 3.26
ATG9A-221ENST00000486766 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
ATG9A-221ENST00000486766 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
ATG9A-221ENST00000486766 BAZ1AQ9NRL2 1556 aaPredicted RBP35.31■■■■□ 3.24
ATG9A-221ENST00000486766 MROH2BQ7Z745 1585 aa35.12■■■■□ 3.21
ATG9A-221ENST00000486766 SMARCA2P51531 1590 aa34.98■■■■□ 3.19
ATG9A-221ENST00000486766 ATAD2BQ9ULI0 1458 aa34.94■■■■□ 3.18
ATG9A-221ENST00000486766 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
ATG9A-221ENST00000486766 WIZO95785 1651 aa34.83■■■■□ 3.17
ATG9A-221ENST00000486766 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
ATG9A-221ENST00000486766 NCAPD3P42695 1498 aa34.83■■■■□ 3.17
ATG9A-221ENST00000486766 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
ATG9A-221ENST00000486766 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
ATG9A-221ENST00000486766 TOP2AP11388 1531 aaKnown RBP34.45■■■■□ 3.11
ATG9A-221ENST00000486766 SUPT5HO00267 1087 aaKnown RBP34.31■■■■□ 3.08
ATG9A-221ENST00000486766 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
ATG9A-221ENST00000486766 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
ATG9A-221ENST00000486766 NESP48681 1621 aa33.93■■■■□ 3.02
ATG9A-221ENST00000486766 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
ATG9A-221ENST00000486766 CFTRP13569 1480 aa33.75■■■□□ 2.99
ATG9A-221ENST00000486766 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
ATG9A-221ENST00000486766 ERCC6Q03468 1493 aa33.68■■■□□ 2.98
ATG9A-221ENST00000486766 KIF21AQ7Z4S6 1674 aa33.65■■■□□ 2.98
ATG9A-221ENST00000486766 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
ATG9A-221ENST00000486766 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
ATG9A-221ENST00000486766 CEP164Q9UPV0 1460 aa33.45■■■□□ 2.95
ATG9A-221ENST00000486766 THOC2Q8NI27 1593 aaKnown RBP33.37■■■□□ 2.93
ATG9A-221ENST00000486766 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
ATG9A-221ENST00000486766 WDR62O43379 1518 aa33.18■■■□□ 2.9
ATG9A-221ENST00000486766 URB2Q14146 1524 aaKnown RBP33.14■■■□□ 2.9
ATG9A-221ENST00000486766 CUX2O14529 1486 aa33.12■■■□□ 2.89
ATG9A-221ENST00000486766 DNMBPQ6XZF7 1577 aa33.05■■■□□ 2.88
ATG9A-221ENST00000486766 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
ATG9A-221ENST00000486766 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
ATG9A-221ENST00000486766 CUX1P39880 1505 aa32.93■■■□□ 2.86
ATG9A-221ENST00000486766 WRNQ14191 1432 aaPredicted RBP eCLIP32.86■■■□□ 2.85
ATG9A-221ENST00000486766 BIVM-ERCC5R4GMW8 1640 aa32.81■■■□□ 2.84
ATG9A-221ENST00000486766 SYNJ1O43426 1573 aa32.81■■■□□ 2.84
ATG9A-221ENST00000486766 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
ATG9A-221ENST00000486766 POLA1P09884 1462 aaPredicted RBP32.76■■■□□ 2.84
ATG9A-221ENST00000486766 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.84
ATG9A-221ENST00000486766 IFT140Q96RY7 1462 aa32.7■■■□□ 2.83
ATG9A-221ENST00000486766 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
ATG9A-221ENST00000486766 SOGA1O94964 1423 aa32.62■■■□□ 2.81
ATG9A-221ENST00000486766 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
ATG9A-221ENST00000486766 DNAJC5Q9H3Z4 198 aa32.6■■■□□ 2.81
ATG9A-221ENST00000486766 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
ATG9A-221ENST00000486766 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
ATG9A-221ENST00000486766 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
ATG9A-221ENST00000486766 ABCA10Q8WWZ4 1543 aa32.44■■■□□ 2.78
ATG9A-221ENST00000486766 AQRO60306 1485 aaKnown RBP eCLIP32.38■■■□□ 2.772e-7■■■■■ 36.4
ATG9A-221ENST00000486766 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
ATG9A-221ENST00000486766 TRIM41Q8WV44 630 aa32.37■■■□□ 2.77
ATG9A-221ENST00000486766 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
ATG9A-221ENST00000486766 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
ATG9A-221ENST00000486766 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
ATG9A-221ENST00000486766 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
ATG9A-221ENST00000486766 GRIN2BQ13224 1484 aa32.21■■■□□ 2.75
ATG9A-221ENST00000486766 KIF27Q86VH2 1401 aa32.15■■■□□ 2.74
ATG9A-221ENST00000486766 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
ATG9A-221ENST00000486766 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
ATG9A-221ENST00000486766 MAGI1Q96QZ7 1491 aaPredicted RBP32.09■■■□□ 2.73
ATG9A-221ENST00000486766 CHD1O14646 1710 aa32.05■■■□□ 2.72
ATG9A-221ENST00000486766 ADAMTS12P58397 1594 aa32■■■□□ 2.71
ATG9A-221ENST00000486766 RUSC2Q8N2Y8 1516 aa31.98■■■□□ 2.71
ATG9A-221ENST00000486766 SYNJ2O15056 1496 aa31.95■■■□□ 2.7
ATG9A-221ENST00000486766 CUL7Q14999 1698 aa31.95■■■□□ 2.7
ATG9A-221ENST00000486766 FBLN2P98095 1184 aa31.93■■■□□ 2.7
ATG9A-221ENST00000486766 IGF1RP08069 1367 aa31.9■■■□□ 2.7
ATG9A-221ENST00000486766 FHAD1B1AJZ9 1412 aa31.9■■■□□ 2.7
ATG9A-221ENST00000486766 CHMP7Q8WUX9 453 aaPredicted RBP31.89■■■□□ 2.7
ATG9A-221ENST00000486766 EEA1Q15075 1411 aa31.81■■■□□ 2.68
ATG9A-221ENST00000486766 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
ATG9A-221ENST00000486766 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
ATG9A-221ENST00000486766 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
ATG9A-221ENST00000486766 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
ATG9A-221ENST00000486766 CSRNP3Q8WYN3 585 aa31.66■■■□□ 2.66
ATG9A-221ENST00000486766 RAPGEF2Q9Y4G8 1499 aa31.65■■■□□ 2.66
ATG9A-221ENST00000486766 CEP170Q5SW79 1584 aa31.65■■■□□ 2.66
ATG9A-221ENST00000486766 NUP160Q12769 1436 aa31.61■■■□□ 2.65
ATG9A-221ENST00000486766 CLASP1Q7Z460 1538 aa31.6■■■□□ 2.65
ATG9A-221ENST00000486766 PRXQ9BXM0 1461 aa31.6■■■□□ 2.65
ATG9A-221ENST00000486766 KIF21BO75037 1637 aa31.51■■■□□ 2.63
ATG9A-221ENST00000486766 CTTNBP2Q8WZ74 1663 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms