RNA–Protein interactions for RNA: ENST00000428226.5

ATG9A-207, Transcript of autophagy related 9A, humanhuman

TSL 5

Gene ATG9A, Length 700 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-207ENST00000428226 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
ATG9A-207ENST00000428226 ABCC9O60706 1549 aa35.71■■■■□ 3.31
ATG9A-207ENST00000428226 CCDC180Q9P1Z9 1646 aa35.62■■■■□ 3.29
ATG9A-207ENST00000428226 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
ATG9A-207ENST00000428226 NACADO15069 1562 aa33.69■■■□□ 2.98
ATG9A-207ENST00000428226 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
ATG9A-207ENST00000428226 DNAJC5BQ9UF47 199 aa33.57■■■□□ 2.96
ATG9A-207ENST00000428226 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
ATG9A-207ENST00000428226 UNC13AQ9UPW8 1703 aa33.21■■■□□ 2.91
ATG9A-207ENST00000428226 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
ATG9A-207ENST00000428226 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
ATG9A-207ENST00000428226 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
ATG9A-207ENST00000428226 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
ATG9A-207ENST00000428226 SCRIBQ14160 1630 aa32.51■■■□□ 2.79
ATG9A-207ENST00000428226 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
ATG9A-207ENST00000428226 CC2D2AQ9P2K1 1620 aa32.24■■■□□ 2.75
ATG9A-207ENST00000428226 EIF4G1Q04637 1599 aaKnown RBP32.16■■■□□ 2.74
ATG9A-207ENST00000428226 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
ATG9A-207ENST00000428226 NCAPD3P42695 1498 aa31.14■■■□□ 2.57
ATG9A-207ENST00000428226 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
ATG9A-207ENST00000428226 SMARCA4P51532 1647 aa31■■■□□ 2.55
ATG9A-207ENST00000428226 SMARCA2P51531 1590 aa30.92■■■□□ 2.54
ATG9A-207ENST00000428226 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
ATG9A-207ENST00000428226 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
ATG9A-207ENST00000428226 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
ATG9A-207ENST00000428226 DNAJC5Q9H3Z4 198 aa30.78■■■□□ 2.52
ATG9A-207ENST00000428226 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
ATG9A-207ENST00000428226 CUX2O14529 1486 aa30.72■■■□□ 2.51
ATG9A-207ENST00000428226 NESP48681 1621 aa30.69■■■□□ 2.5
ATG9A-207ENST00000428226 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
ATG9A-207ENST00000428226 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
ATG9A-207ENST00000428226 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
ATG9A-207ENST00000428226 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
ATG9A-207ENST00000428226 WIZO95785 1651 aa30.28■■■□□ 2.44
ATG9A-207ENST00000428226 KIF21AQ7Z4S6 1674 aa30.27■■■□□ 2.44
ATG9A-207ENST00000428226 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
ATG9A-207ENST00000428226 CADPSQ9ULU8 1353 aa30.19■■■□□ 2.42
ATG9A-207ENST00000428226 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
ATG9A-207ENST00000428226 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
ATG9A-207ENST00000428226 WDR62O43379 1518 aa29.91■■■□□ 2.38
ATG9A-207ENST00000428226 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
ATG9A-207ENST00000428226 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
ATG9A-207ENST00000428226 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
ATG9A-207ENST00000428226 CFTRP13569 1480 aa29.84■■■□□ 2.37
ATG9A-207ENST00000428226 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
ATG9A-207ENST00000428226 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
ATG9A-207ENST00000428226 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
ATG9A-207ENST00000428226 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
ATG9A-207ENST00000428226 OSCARQ8IYS5 282 aa29.36■■■□□ 2.29
ATG9A-207ENST00000428226 TOPBP1Q92547 1522 aa29.28■■■□□ 2.28
ATG9A-207ENST00000428226 ZNF608Q9ULD9 1512 aaPredicted RBP29.27■■■□□ 2.28
ATG9A-207ENST00000428226 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
ATG9A-207ENST00000428226 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
ATG9A-207ENST00000428226 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
ATG9A-207ENST00000428226 EIF4G3O43432 1585 aaKnown RBP29.07■■■□□ 2.24
ATG9A-207ENST00000428226 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
ATG9A-207ENST00000428226 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.232e-7■■■■■ 36.4
ATG9A-207ENST00000428226 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
ATG9A-207ENST00000428226 RIMBP3CA6NJZ7 1639 aa28.98■■■□□ 2.23
ATG9A-207ENST00000428226 RIMBP3BA6NNM3 1639 aa28.98■■■□□ 2.23
ATG9A-207ENST00000428226 RIMBP3Q9UFD9 1639 aa28.98■■■□□ 2.23
ATG9A-207ENST00000428226 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
ATG9A-207ENST00000428226 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
ATG9A-207ENST00000428226 CHD1O14646 1710 aa28.86■■■□□ 2.21
ATG9A-207ENST00000428226 SOGA1O94964 1423 aa28.86■■■□□ 2.21
ATG9A-207ENST00000428226 TDRD9Q8NDG6 1382 aaKnown RBP28.83■■■□□ 2.21
ATG9A-207ENST00000428226 FBLN2P98095 1184 aa28.81■■■□□ 2.2
ATG9A-207ENST00000428226 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
ATG9A-207ENST00000428226 CUX1P39880 1505 aa28.79■■■□□ 2.2
ATG9A-207ENST00000428226 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
ATG9A-207ENST00000428226 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
ATG9A-207ENST00000428226 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
ATG9A-207ENST00000428226 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
ATG9A-207ENST00000428226 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
ATG9A-207ENST00000428226 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
ATG9A-207ENST00000428226 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
ATG9A-207ENST00000428226 MAGI1Q96QZ7 1491 aaPredicted RBP28.58■■■□□ 2.17
ATG9A-207ENST00000428226 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
ATG9A-207ENST00000428226 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
ATG9A-207ENST00000428226 GAPVD1Q14C86 1478 aa28.5■■■□□ 2.15
ATG9A-207ENST00000428226 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
ATG9A-207ENST00000428226 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
ATG9A-207ENST00000428226 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
ATG9A-207ENST00000428226 ABCA5Q8WWZ7 1642 aa28.42■■■□□ 2.14
ATG9A-207ENST00000428226 TRHP20396 242 aaPredicted RBP28.38■■■□□ 2.13
ATG9A-207ENST00000428226 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
ATG9A-207ENST00000428226 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
ATG9A-207ENST00000428226 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
ATG9A-207ENST00000428226 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
ATG9A-207ENST00000428226 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
ATG9A-207ENST00000428226 CEP170Q5SW79 1584 aa28.15■■■□□ 2.1
ATG9A-207ENST00000428226 NUP160Q12769 1436 aa28.14■■■□□ 2.1
ATG9A-207ENST00000428226 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
ATG9A-207ENST00000428226 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
ATG9A-207ENST00000428226 ERICH3Q5RHP9 1530 aa28.09■■■□□ 2.09
ATG9A-207ENST00000428226 SHROOM2Q13796 1616 aa28■■■□□ 2.07
ATG9A-207ENST00000428226 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
ATG9A-207ENST00000428226 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
ATG9A-207ENST00000428226 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
ATG9A-207ENST00000428226 IGF1RP08069 1367 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms