Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TES-210ENST00000496871 961 ntTSL 1 (best)24.2■■□□□ 1.464e-11■■■■□ 24.3
XRN2Q9H0D6 TES-208ENST00000492891 1022 ntTSL 221.1■□□□□ 0.974e-11■■■■□ 24.3
XRN2Q9H0D6 TES-205ENST00000461440 873 ntTSL 218■□□□□ 0.474e-11■■■■□ 24.3
XRN2Q9H0D6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.384e-11■■■■□ 24.3
XRN2Q9H0D6 LARP1-215ENST00000524248 2128 ntTSL 515.71■□□□□ 0.114e-11■■■■□ 24.3
XRN2Q9H0D6 CHD2-229ENST00000637789 904 ntTSL 512.98□□□□□ -0.335e-7■■■■□ 24.3
XRN2Q9H0D6 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-9■■■■□ 24.3
XRN2Q9H0D6 CHD2-205ENST00000625662 5127 ntTSL 512.36□□□□□ -0.435e-7■■■■□ 24.3
XRN2Q9H0D6 CHD2-223ENST00000636306 1755 ntTSL 510.52□□□□□ -0.725e-7■■■■□ 24.3
XRN2Q9H0D6 CHD2-216ENST00000629104 649 ntTSL 510.29□□□□□ -0.765e-7■■■■□ 24.3
XRN2Q9H0D6 CHD2-226ENST00000636881 3545 ntTSL 58.05□□□□□ -1.125e-7■■■■□ 24.3
XRN2Q9H0D6 FAM20B-202ENST00000440702 603 ntTSL 320.94■□□□□ 0.944e-8■■■■□ 24.3
XRN2Q9H0D6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.664e-8■■■■□ 24.3
XRN2Q9H0D6 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.356e-11■■■■□ 24.3
XRN2Q9H0D6 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.65□□□□□ -0.386e-11■■■■□ 24.3
XRN2Q9H0D6 ZFAND3-207ENST00000474522 563 ntTSL 56.45□□□□□ -1.386e-11■■■■□ 24.3
XRN2Q9H0D6 MTG1-204ENST00000473735 2212 ntTSL 522.39■■□□□ 1.183e-7■■■■□ 24.2
XRN2Q9H0D6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.67■■□□□ 1.063e-7■■■■□ 24.2
XRN2Q9H0D6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.963e-7■■■■□ 24.2
XRN2Q9H0D6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.693e-7■■■■□ 24.2
XRN2Q9H0D6 MTG1-202ENST00000432508 953 ntTSL 219.19■□□□□ 0.663e-7■■■■□ 24.2
XRN2Q9H0D6 MTG1-203ENST00000460848 2730 ntTSL 213.57□□□□□ -0.243e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-212ENST00000556565 566 ntTSL 420.69■□□□□ 0.98e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.9■□□□□ 0.788e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-211ENST00000556536 925 ntTSL 319.67■□□□□ 0.748e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-213ENST00000557262 888 ntTSL 1 (best)19.25■□□□□ 0.678e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.19■□□□□ 0.668e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-214ENST00000557490 806 ntTSL 518.56■□□□□ 0.568e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-210ENST00000555810 767 ntTSL 318.14■□□□□ 0.498e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.458e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.72■□□□□ 0.438e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.71■□□□□ 0.278e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-207ENST00000554927 561 ntTSL 216.57■□□□□ 0.248e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.29■□□□□ 0.28e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-209ENST00000555609 1855 ntTSL 316.1■□□□□ 0.178e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-202ENST00000553656 550 ntTSL 415.89■□□□□ 0.138e-7■■■■□ 24.2
XRN2Q9H0D6 TUBB3-204ENST00000554116 542 ntTSL 414.3□□□□□ -0.128e-7■■■■□ 24.2
XRN2Q9H0D6 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.238e-7■■■■□ 24.2
XRN2Q9H0D6 CIRBP-218ENST00000588344 370 ntTSL 310.34□□□□□ -0.755e-7■■■■□ 24.2
XRN2Q9H0D6 SF3A2-207ENST00000592839 724 ntTSL 217.74■□□□□ 0.433e-12■■■■□ 24.2
XRN2Q9H0D6 RHEB-205ENST00000478470 1153 ntTSL 530.12■■■□□ 2.418e-8■■■■□ 24.2
XRN2Q9H0D6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.758e-8■■■■□ 24.2
XRN2Q9H0D6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.49■□□□□ 0.238e-8■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.41■■□□□ 1.54e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.09■■□□□ 1.294e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-204ENST00000394449 2048 ntTSL 521.65■■□□□ 1.064e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.48■□□□□ 0.074e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-207ENST00000441162 2636 ntTSL 214.4□□□□□ -0.14e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.224e-6■■■■□ 24.2
XRN2Q9H0D6 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.84□□□□□ -0.354e-6■■■■□ 24.2
XRN2Q9H0D6 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)24.85■■□□□ 1.571e-8■■■■□ 24.2
XRN2Q9H0D6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.161e-8■■■■□ 24.2
XRN2Q9H0D6 STAT5B-202ENST00000415845 559 ntTSL 47.09□□□□□ -1.271e-8■■■■□ 24.2
XRN2Q9H0D6 MRPS6-202ENST00000477091 1061 ntTSL 520.61■□□□□ 0.892e-9■■■■□ 24.2
XRN2Q9H0D6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.612e-9■■■■□ 24.2
XRN2Q9H0D6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.5■□□□□ 0.552e-9■■■■□ 24.2
XRN2Q9H0D6 MRPS6-205ENST00000488492 909 ntTSL 57.54□□□□□ -1.22e-9■■■■□ 24.2
XRN2Q9H0D6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.832e-9■■■■□ 24.2
XRN2Q9H0D6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.231e-6■■■■□ 24.2
XRN2Q9H0D6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.36■■□□□ 1.015e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-206ENST00000503693 1182 ntTSL 1 (best)22.97■■□□□ 1.273e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-212ENST00000509531 1001 ntTSL 1 (best)22.97■■□□□ 1.273e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.39■■□□□ 1.183e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.33■■□□□ 1.173e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-216ENST00000512308 839 ntTSL 520.43■□□□□ 0.863e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-203ENST00000502558 570 ntTSL 219.59■□□□□ 0.733e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.51■□□□□ 0.713e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-218ENST00000513301 595 ntTSL 419.39■□□□□ 0.693e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-211ENST00000509254 598 ntTSL 419.26■□□□□ 0.673e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.48■□□□□ 0.553e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-217ENST00000512842 550 ntTSL 417.04■□□□□ 0.323e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.89■□□□□ 0.293e-6■■■■□ 24.1
XRN2Q9H0D6 MAEA-205ENST00000503653 845 ntTSL 315.98■□□□□ 0.153e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-213ENST00000440293 580 ntTSL 421.65■■□□□ 1.063e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-208ENST00000425451 621 ntTSL 521.6■■□□□ 1.053e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-212ENST00000434070 645 ntTSL 421.49■■□□□ 1.033e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-204ENST00000417107 569 ntTSL 421.49■■□□□ 1.033e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-205ENST00000417902 576 ntTSL 320.98■□□□□ 0.953e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-210ENST00000430670 914 ntTSL 519.88■□□□□ 0.773e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-211ENST00000433685 402 ntTSL 318.04■□□□□ 0.483e-6■■■■□ 24.1
XRN2Q9H0D6 HDAC7-215ENST00000447463 555 ntTSL 416.11■□□□□ 0.173e-6■■■■□ 24.1
XRN2Q9H0D6 PFKL-205ENST00000466134 5986 ntTSL 220.1■□□□□ 0.818e-7■■■■□ 24.1
XRN2Q9H0D6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.378e-7■■■■□ 24.1
XRN2Q9H0D6 PFKL-202ENST00000397961 3390 ntTSL 1 (best)14.5□□□□□ -0.098e-7■■■■□ 24.1
XRN2Q9H0D6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.516e-8■■■■□ 24.1
XRN2Q9H0D6 CTBP1-214ENST00000514495 564 ntTSL 233.19■■■□□ 2.96e-7■■■■□ 24.1
XRN2Q9H0D6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.8■■□□□ 1.561e-6■■■■□ 24.1
XRN2Q9H0D6 CTBP1-217ENST00000515399 985 ntTSL 322.97■■□□□ 1.276e-7■■■■□ 24.1
XRN2Q9H0D6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.21e-6■■■■□ 24.1
XRN2Q9H0D6 CTBP1-208ENST00000506180 843 ntTSL 522.16■■□□□ 1.141e-6■■■■□ 24.1
XRN2Q9H0D6 CTBP1-212ENST00000513420 704 ntTSL 317.82■□□□□ 0.447e-7■■■■□ 24.1
XRN2Q9H0D6 CTBP1-213ENST00000514210 856 ntTSL 217.75■□□□□ 0.431e-6■■■■□ 24.1
XRN2Q9H0D6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-6■■■■□ 24.1
XRN2Q9H0D6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.54■■■■□ 3.445e-11■■■■□ 24
XRN2Q9H0D6 HMGN1-217ENST00000489072 1014 ntTSL 329.72■■■□□ 2.354e-10■■■■□ 24
XRN2Q9H0D6 RPL35-203ENST00000487431 785 ntTSL 1 (best)26.03■■□□□ 1.765e-6■■■■□ 24
XRN2Q9H0D6 C11orf95-201ENST00000338498 723 ntTSL 1 (best)25.79■■□□□ 1.723e-6■■■■□ 24
XRN2Q9H0D6 ZFYVE21-203ENST00000553512 636 ntTSL 525.74■■□□□ 1.715e-11■■■■□ 24
XRN2Q9H0D6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.371e-6■■■■□ 24
Retrieved 100 of 21,068 protein–RNA pairs in 153.4 ms