RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
CHD2-205ENST00000625662 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
CHD2-205ENST00000625662 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
CHD2-205ENST00000625662 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
CHD2-205ENST00000625662 SHROOM4Q9ULL8 1493 aa19.33■□□□□ 0.68
CHD2-205ENST00000625662 APLP2Q06481 763 aa18.8■□□□□ 0.6
CHD2-205ENST00000625662 ABCC9O60706 1549 aa18.65■□□□□ 0.58
CHD2-205ENST00000625662 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.54
CHD2-205ENST00000625662 MYT1Q01538 1121 aa18.36■□□□□ 0.53
CHD2-205ENST00000625662 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
CHD2-205ENST00000625662 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.58e-7■□□□□ 10.3
CHD2-205ENST00000625662 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
CHD2-205ENST00000625662 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
CHD2-205ENST00000625662 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
CHD2-205ENST00000625662 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
CHD2-205ENST00000625662 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
CHD2-205ENST00000625662 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.46
CHD2-205ENST00000625662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CHD2-205ENST00000625662 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CHD2-205ENST00000625662 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
CHD2-205ENST00000625662 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
CHD2-205ENST00000625662 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
CHD2-205ENST00000625662 FBLN2P98095 1184 aa17.58■□□□□ 0.41
CHD2-205ENST00000625662 NACADO15069 1562 aa17.53■□□□□ 0.4
CHD2-205ENST00000625662 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
CHD2-205ENST00000625662 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHD2-205ENST00000625662 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
CHD2-205ENST00000625662 PCGF6Q9BYE7 350 aa17.33■□□□□ 0.36
CHD2-205ENST00000625662 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
CHD2-205ENST00000625662 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
CHD2-205ENST00000625662 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
CHD2-205ENST00000625662 ITGAEP38570 1179 aa17.16■□□□□ 0.34
CHD2-205ENST00000625662 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
CHD2-205ENST00000625662 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
CHD2-205ENST00000625662 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
CHD2-205ENST00000625662 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
CHD2-205ENST00000625662 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
CHD2-205ENST00000625662 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
CHD2-205ENST00000625662 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
CHD2-205ENST00000625662 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
CHD2-205ENST00000625662 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
CHD2-205ENST00000625662 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
CHD2-205ENST00000625662 BCANQ96GW7 911 aa16.9■□□□□ 0.3
CHD2-205ENST00000625662 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CHD2-205ENST00000625662 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.3
CHD2-205ENST00000625662 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
CHD2-205ENST00000625662 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
CHD2-205ENST00000625662 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
CHD2-205ENST00000625662 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
CHD2-205ENST00000625662 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
CHD2-205ENST00000625662 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
CHD2-205ENST00000625662 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
CHD2-205ENST00000625662 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.27
CHD2-205ENST00000625662 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.27
CHD2-205ENST00000625662 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
CHD2-205ENST00000625662 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
CHD2-205ENST00000625662 NEFLP07196 543 aa16.72■□□□□ 0.27
CHD2-205ENST00000625662 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
CHD2-205ENST00000625662 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
CHD2-205ENST00000625662 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
CHD2-205ENST00000625662 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
CHD2-205ENST00000625662 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
CHD2-205ENST00000625662 EEA1Q15075 1411 aa16.62■□□□□ 0.25
CHD2-205ENST00000625662 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
CHD2-205ENST00000625662 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
CHD2-205ENST00000625662 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
CHD2-205ENST00000625662 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
CHD2-205ENST00000625662 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
CHD2-205ENST00000625662 NEFMP07197 916 aa16.55■□□□□ 0.24
CHD2-205ENST00000625662 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
CHD2-205ENST00000625662 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
CHD2-205ENST00000625662 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
CHD2-205ENST00000625662 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
CHD2-205ENST00000625662 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
CHD2-205ENST00000625662 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
CHD2-205ENST00000625662 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
CHD2-205ENST00000625662 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
CHD2-205ENST00000625662 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
CHD2-205ENST00000625662 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
CHD2-205ENST00000625662 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
CHD2-205ENST00000625662 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
CHD2-205ENST00000625662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.215e-7■■■□□ 15.2
CHD2-205ENST00000625662 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
CHD2-205ENST00000625662 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
CHD2-205ENST00000625662 CLIP1P30622 1438 aa16.33■□□□□ 0.2
CHD2-205ENST00000625662 CUX2O14529 1486 aa16.32■□□□□ 0.2
CHD2-205ENST00000625662 SOGA1O94964 1423 aa16.3■□□□□ 0.2
CHD2-205ENST00000625662 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
CHD2-205ENST00000625662 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
CHD2-205ENST00000625662 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
CHD2-205ENST00000625662 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
CHD2-205ENST00000625662 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
CHD2-205ENST00000625662 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
CHD2-205ENST00000625662 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
CHD2-205ENST00000625662 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
CHD2-205ENST00000625662 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
CHD2-205ENST00000625662 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
CHD2-205ENST00000625662 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
CHD2-205ENST00000625662 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
CHD2-205ENST00000625662 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms