RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
TUBB3-211ENST00000556536 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
TUBB3-211ENST00000556536 ABCC9O60706 1549 aa35.9■■■■□ 3.34
TUBB3-211ENST00000556536 ZCCHC6Q5VYS8 1495 aaKnown RBP34.48■■■■□ 3.11
TUBB3-211ENST00000556536 DCAF8L2P0C7V8 631 aa34.32■■■■□ 3.08
TUBB3-211ENST00000556536 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
TUBB3-211ENST00000556536 DNAJC5BQ9UF47 199 aa34.08■■■■□ 3.05
TUBB3-211ENST00000556536 NACADO15069 1562 aa34.06■■■■□ 3.04
TUBB3-211ENST00000556536 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
TUBB3-211ENST00000556536 RB1CC1Q8TDY2 1594 aa34.01■■■■□ 3.03
TUBB3-211ENST00000556536 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
TUBB3-211ENST00000556536 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
TUBB3-211ENST00000556536 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
TUBB3-211ENST00000556536 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
TUBB3-211ENST00000556536 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
TUBB3-211ENST00000556536 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
TUBB3-211ENST00000556536 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
TUBB3-211ENST00000556536 EIF4G1Q04637 1599 aaKnown RBP32.25■■■□□ 2.75
TUBB3-211ENST00000556536 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
TUBB3-211ENST00000556536 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
TUBB3-211ENST00000556536 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
TUBB3-211ENST00000556536 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
TUBB3-211ENST00000556536 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
TUBB3-211ENST00000556536 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
TUBB3-211ENST00000556536 PEG3Q9GZU2 1588 aa31.52■■■□□ 2.64
TUBB3-211ENST00000556536 SMARCA2P51531 1590 aa31.51■■■□□ 2.64
TUBB3-211ENST00000556536 WIZO95785 1651 aa31.48■■■□□ 2.63
TUBB3-211ENST00000556536 NCAPD3P42695 1498 aa31.47■■■□□ 2.63
TUBB3-211ENST00000556536 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
TUBB3-211ENST00000556536 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
TUBB3-211ENST00000556536 HMGXB3Q12766 1538 aa31.33■■■□□ 2.61
TUBB3-211ENST00000556536 CUX2O14529 1486 aa31.21■■■□□ 2.59
TUBB3-211ENST00000556536 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
TUBB3-211ENST00000556536 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
TUBB3-211ENST00000556536 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
TUBB3-211ENST00000556536 NESP48681 1621 aa30.69■■■□□ 2.5
TUBB3-211ENST00000556536 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
TUBB3-211ENST00000556536 CFTRP13569 1480 aa30.53■■■□□ 2.48
TUBB3-211ENST00000556536 THOC2Q8NI27 1593 aaKnown RBP30.51■■■□□ 2.47
TUBB3-211ENST00000556536 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
TUBB3-211ENST00000556536 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
TUBB3-211ENST00000556536 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
TUBB3-211ENST00000556536 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
TUBB3-211ENST00000556536 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
TUBB3-211ENST00000556536 CEP164Q9UPV0 1460 aa30.13■■■□□ 2.41
TUBB3-211ENST00000556536 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
TUBB3-211ENST00000556536 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
TUBB3-211ENST00000556536 WDR62O43379 1518 aa30■■■□□ 2.39
TUBB3-211ENST00000556536 URB2Q14146 1524 aaKnown RBP29.93■■■□□ 2.38
TUBB3-211ENST00000556536 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
TUBB3-211ENST00000556536 CUX1P39880 1505 aa29.83■■■□□ 2.37
TUBB3-211ENST00000556536 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
TUBB3-211ENST00000556536 TOPBP1Q92547 1522 aa29.82■■■□□ 2.36
TUBB3-211ENST00000556536 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
TUBB3-211ENST00000556536 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
TUBB3-211ENST00000556536 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
TUBB3-211ENST00000556536 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
TUBB3-211ENST00000556536 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
TUBB3-211ENST00000556536 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
TUBB3-211ENST00000556536 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
TUBB3-211ENST00000556536 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
TUBB3-211ENST00000556536 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
TUBB3-211ENST00000556536 SOGA1O94964 1423 aa29.52■■■□□ 2.32
TUBB3-211ENST00000556536 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
TUBB3-211ENST00000556536 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
TUBB3-211ENST00000556536 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
TUBB3-211ENST00000556536 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
TUBB3-211ENST00000556536 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
TUBB3-211ENST00000556536 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
TUBB3-211ENST00000556536 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
TUBB3-211ENST00000556536 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
TUBB3-211ENST00000556536 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
TUBB3-211ENST00000556536 AQRO60306 1485 aaKnown RBP eCLIP29.27■■■□□ 2.28
TUBB3-211ENST00000556536 ARHGEF11O15085 1522 aa29.2■■■□□ 2.26
TUBB3-211ENST00000556536 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
TUBB3-211ENST00000556536 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
TUBB3-211ENST00000556536 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
TUBB3-211ENST00000556536 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
TUBB3-211ENST00000556536 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.25
TUBB3-211ENST00000556536 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
TUBB3-211ENST00000556536 IGF1RP08069 1367 aa29.01■■■□□ 2.24
TUBB3-211ENST00000556536 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
TUBB3-211ENST00000556536 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
TUBB3-211ENST00000556536 SNAPC4Q5SXM2 1469 aa28.98■■■□□ 2.23
TUBB3-211ENST00000556536 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
TUBB3-211ENST00000556536 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
TUBB3-211ENST00000556536 EEA1Q15075 1411 aa28.94■■■□□ 2.22
TUBB3-211ENST00000556536 CHD1O14646 1710 aa28.92■■■□□ 2.22
TUBB3-211ENST00000556536 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
TUBB3-211ENST00000556536 CSRNP3Q8WYN3 585 aa28.89■■■□□ 2.22
TUBB3-211ENST00000556536 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
TUBB3-211ENST00000556536 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
TUBB3-211ENST00000556536 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
TUBB3-211ENST00000556536 TRHP20396 242 aaPredicted RBP28.84■■■□□ 2.21
TUBB3-211ENST00000556536 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
TUBB3-211ENST00000556536 FBLN2P98095 1184 aa28.82■■■□□ 2.2
TUBB3-211ENST00000556536 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
TUBB3-211ENST00000556536 CHMP7Q8WUX9 453 aaPredicted RBP28.79■■■□□ 2.2
TUBB3-211ENST00000556536 CUL7Q14999 1698 aa28.78■■■□□ 2.2
TUBB3-211ENST00000556536 PRXQ9BXM0 1461 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms