Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 AP005435.1-201ENST00000529293 1178 ntBASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH3Q8TBE1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.66■□□□□ 0.58
CNIH3Q8TBE1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 UNC93B8-201ENST00000511903 705 ntBASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH3Q8TBE1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNIH3Q8TBE1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH3Q8TBE1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 SMUG1P1-201ENST00000590640 811 ntBASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.63■□□□□ 0.57
CNIH3Q8TBE1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms