Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CCDC130-208ENST00000588071 1157 ntTSL 512.29□□□□□ -0.448e-8■■■□□ 15.4
SRSF1Q07955 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC11.91□□□□□ -0.58e-8■■■□□ 15.4
SRSF1Q07955 TYK2-215ENST00000530560 558 ntTSL 311.89□□□□□ -0.518e-8■■■□□ 15.4
SRSF1Q07955 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.595e-7■■■□□ 15.4
SRSF1Q07955 TXNRD2-216ENST00000495655 2700 ntTSL 210.85□□□□□ -0.678e-8■■■□□ 15.4
SRSF1Q07955 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.688e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.683e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-201ENST00000323981 2540 ntTSL 210.61□□□□□ -0.711e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-204ENST00000465445 2554 ntTSL 510.19□□□□□ -0.782e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-205ENST00000535852 2471 ntTSL 1 (best)9.97□□□□□ -0.812e-8■■■□□ 15.4
SRSF1Q07955 CSTF3-205ENST00000524775 434 ntTSL 49.77□□□□□ -0.858e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-203ENST00000460049 2672 ntTSL 1 (best)9.47□□□□□ -0.893e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.943e-8■■■□□ 15.4
SRSF1Q07955 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC9.14□□□□□ -0.958e-8■■■□□ 15.4
SRSF1Q07955 TYK2-208ENST00000527481 628 ntTSL 39.03□□□□□ -0.968e-8■■■□□ 15.4
SRSF1Q07955 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.978e-8■■■□□ 15.4
SRSF1Q07955 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.18e-8■■■□□ 15.4
SRSF1Q07955 AP1G2-212ENST00000554554 2955 ntTSL 28.02□□□□□ -1.136e-11■■■□□ 15.4
SRSF1Q07955 CSTF3-207ENST00000526480 479 ntTSL 37.12□□□□□ -1.278e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-204ENST00000525928 1710 ntTSL 26.61□□□□□ -1.351e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-210ENST00000529435 1011 ntTSL 56.05□□□□□ -1.441e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-222ENST00000546088 1728 ntTSL 35.84□□□□□ -1.471e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-214ENST00000530089 1429 ntTSL 35.58□□□□□ -1.521e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-212ENST00000529794 1123 ntTSL 25.42□□□□□ -1.541e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-218ENST00000533794 505 ntTSL 25.41□□□□□ -1.541e-8■■■□□ 15.4
SRSF1Q07955 IWS1-211ENST00000497888 592 ntTSL 24.64□□□□□ -1.678e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-221ENST00000540232 483 ntTSL 34.35□□□□□ -1.711e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-215ENST00000530769 4358 ntTSL 24.25□□□□□ -1.731e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-202ENST00000393259 547 ntTSL 34.14□□□□□ -1.751e-8■■■□□ 15.4
SRSF1Q07955 NRBP2-209ENST00000533093 3877 ntTSL 1 (best)13.39□□□□□ -0.274e-7■■■□□ 15.4
SRSF1Q07955 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.284e-7■■■□□ 15.4
SRSF1Q07955 ZGPAT-208ENST00000472711 787 ntTSL 318.52■□□□□ 0.566e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-212ENST00000527399 1041 ntTSL 513.96□□□□□ -0.172e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-210ENST00000526560 545 ntTSL 411.49□□□□□ -0.572e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-207ENST00000525335 1146 ntTSL 511.17□□□□□ -0.622e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-202ENST00000344591 936 ntTSL 210.64□□□□□ -0.712e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-204ENST00000433877 1956 ntTSL 210.49□□□□□ -0.732e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-220ENST00000532695 2001 ntTSL 29.87□□□□□ -0.832e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-214ENST00000527796 3156 ntTSL 57.54□□□□□ -1.22e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.392e-7■■■□□ 15.4
SRSF1Q07955 RSRC2-215ENST00000528263 792 ntTSL 35.53□□□□□ -1.524e-10■■■□□ 15.4
SRSF1Q07955 RSRC2-211ENST00000527173 2570 ntTSL 24.86□□□□□ -1.634e-10■■■□□ 15.4
SRSF1Q07955 RSRC2-205ENST00000524399 625 ntTSL 24.71□□□□□ -1.664e-10■■■□□ 15.4
SRSF1Q07955 CEP250-207ENST00000425934 2156 ntTSL 511.39□□□□□ -0.591e-6■■■□□ 15.4
SRSF1Q07955 CEP250-209ENST00000461386 2295 ntTSL 210.5□□□□□ -0.731e-6■■■□□ 15.4
SRSF1Q07955 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.391e-6■■■□□ 15.4
SRSF1Q07955 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.043e-6■■■□□ 15.4
SRSF1Q07955 SUPT6H-211ENST00000584312 483 ntTSL 26.07□□□□□ -1.448e-7■■■□□ 15.4
SRSF1Q07955 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.547e-7■■■□□ 15.3
SRSF1Q07955 MSH5-206ENST00000423982 2706 ntTSL 511.29□□□□□ -0.67e-7■■■□□ 15.3
SRSF1Q07955 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.637e-7■■■□□ 15.3
SRSF1Q07955 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.67□□□□□ -0.77e-7■■■□□ 15.3
SRSF1Q07955 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.87e-7■■■□□ 15.3
SRSF1Q07955 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC8.42□□□□□ -1.067e-7■■■□□ 15.3
SRSF1Q07955 MSH5-211ENST00000463144 2296 ntTSL 58.01□□□□□ -1.137e-7■■■□□ 15.3
SRSF1Q07955 TTLL3-210ENST00000427220 3233 ntTSL 1 (best)14.76□□□□□ -0.052e-7■■■□□ 15.3
SRSF1Q07955 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.112e-7■■■□□ 15.3
SRSF1Q07955 TTLL3-214ENST00000431204 1041 ntTSL 512.04□□□□□ -0.482e-7■■■□□ 15.3
SRSF1Q07955 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.62e-7■■■□□ 15.3
SRSF1Q07955 TTLL3-211ENST00000430390 1674 ntTSL 1 (best)10.28□□□□□ -0.762e-7■■■□□ 15.3
SRSF1Q07955 PCF11-206ENST00000533018 580 ntTSL 317.19■□□□□ 0.346e-9■■■□□ 15.3
SRSF1Q07955 PCF11-203ENST00000530304 2649 ntTSL 1 (best)14.82□□□□□ -0.046e-9■■■□□ 15.3
SRSF1Q07955 PCF11-207ENST00000624931 1720 nt14.38□□□□□ -0.116e-9■■■□□ 15.3
SRSF1Q07955 PCF11-204ENST00000530660 3309 ntTSL 211.23□□□□□ -0.616e-9■■■□□ 15.3
SRSF1Q07955 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.786e-9■■■□□ 15.3
SRSF1Q07955 VEGFA-216ENST00000512683 475 ntTSL 1 (best)12.41□□□□□ -0.424e-8■■■□□ 15.3
SRSF1Q07955 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.648e-7■■■□□ 15.3
SRSF1Q07955 ANKRD11-202ENST00000330736 8342 ntTSL 511.43□□□□□ -0.582e-7■■■□□ 15.3
SRSF1Q07955 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.164e-7■■■□□ 15.3
SRSF1Q07955 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.424e-7■■■□□ 15.3
SRSF1Q07955 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.486e-10■■■□□ 15.3
SRSF1Q07955 ACAA1-212ENST00000460424 538 ntTSL 421.46■■□□□ 1.031e-6■■■□□ 15.3
SRSF1Q07955 ACAA1-218ENST00000489559 579 ntTSL 420.84■□□□□ 0.931e-6■■■□□ 15.3
SRSF1Q07955 ACAA1-217ENST00000484284 580 ntTSL 217.31■□□□□ 0.361e-6■■■□□ 15.3
SRSF1Q07955 DNHD1-204ENST00000473019 1842 ntTSL 211.92□□□□□ -0.51e-12■■■□□ 15.3
SRSF1Q07955 HDAC6-215ENST00000465457 563 ntTSL 513.9□□□□□ -0.181e-10■■■□□ 15.3
SRSF1Q07955 HDAC6-227ENST00000485102 667 ntTSL 313.03□□□□□ -0.321e-10■■■□□ 15.3
SRSF1Q07955 HDAC6-220ENST00000477528 4832 ntTSL 1 (best)11.62□□□□□ -0.551e-10■■■□□ 15.3
SRSF1Q07955 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.911e-10■■■□□ 15.3
SRSF1Q07955 HDAC6-228ENST00000486227 4718 ntTSL 28.74□□□□□ -1.011e-10■■■□□ 15.3
SRSF1Q07955 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.041e-10■■■□□ 15.3
SRSF1Q07955 MSH5-218ENST00000494646 528 ntTSL 49.19□□□□□ -0.942e-10■■■□□ 15.3
SRSF1Q07955 MICALL2-206ENST00000470807 668 ntTSL 315.8■□□□□ 0.122e-6■■■□□ 15.3
SRSF1Q07955 SEC31A-206ENST00000436790 1717 ntTSL 1 (best)16.08■□□□□ 0.179e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.759e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.89e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.839e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.099e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.229e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.54□□□□□ -1.369e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.03□□□□□ -1.69e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.41□□□□□ -1.79e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.84□□□□□ -1.799e-7■■■□□ 15.2
SRSF1Q07955 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.869e-7■■■□□ 15.2
SRSF1Q07955 TAOK2-206ENST00000570844 1721 ntTSL 217.87■□□□□ 0.457e-9■■■□□ 15.2
SRSF1Q07955 FANCA-224ENST00000567510 461 ntTSL 35.94□□□□□ -1.467e-13■■■□□ 15.2
SRSF1Q07955 CHD6-204ENST00000440647 536 ntTSL 35.73□□□□□ -1.497e-9■■■□□ 15.2
SRSF1Q07955 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC5.84□□□□□ -1.472e-6■■■□□ 15.2
SRSF1Q07955 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.95■■□□□ 1.19e-7■■■□□ 15.2
SRSF1Q07955 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.059e-7■■■□□ 15.2
Retrieved 100 of 14,836 protein–RNA pairs in 107.6 ms