RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
CSTF3-205ENST00000524775 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
CSTF3-205ENST00000524775 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
CSTF3-205ENST00000524775 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
CSTF3-205ENST00000524775 ABCC9O60706 1549 aa22.25■■□□□ 1.15
CSTF3-205ENST00000524775 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
CSTF3-205ENST00000524775 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
CSTF3-205ENST00000524775 NACADO15069 1562 aa21.96■■□□□ 1.11
CSTF3-205ENST00000524775 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
CSTF3-205ENST00000524775 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
CSTF3-205ENST00000524775 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
CSTF3-205ENST00000524775 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.03
CSTF3-205ENST00000524775 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
CSTF3-205ENST00000524775 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
CSTF3-205ENST00000524775 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
CSTF3-205ENST00000524775 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
CSTF3-205ENST00000524775 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CSTF3-205ENST00000524775 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
CSTF3-205ENST00000524775 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.92
CSTF3-205ENST00000524775 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
CSTF3-205ENST00000524775 WIZO95785 1651 aa20.73■□□□□ 0.91
CSTF3-205ENST00000524775 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
CSTF3-205ENST00000524775 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
CSTF3-205ENST00000524775 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
CSTF3-205ENST00000524775 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
CSTF3-205ENST00000524775 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
CSTF3-205ENST00000524775 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
CSTF3-205ENST00000524775 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
CSTF3-205ENST00000524775 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
CSTF3-205ENST00000524775 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
CSTF3-205ENST00000524775 CC2D2AQ9P2K1 1620 aa20.21■□□□□ 0.83
CSTF3-205ENST00000524775 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
CSTF3-205ENST00000524775 PRDM2Q13029 1718 aa19.83■□□□□ 0.77
CSTF3-205ENST00000524775 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
CSTF3-205ENST00000524775 CFTRP13569 1480 aa19.79■□□□□ 0.76
CSTF3-205ENST00000524775 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
CSTF3-205ENST00000524775 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
CSTF3-205ENST00000524775 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
CSTF3-205ENST00000524775 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
CSTF3-205ENST00000524775 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
CSTF3-205ENST00000524775 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
CSTF3-205ENST00000524775 NESP48681 1621 aa19.58■□□□□ 0.73
CSTF3-205ENST00000524775 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
CSTF3-205ENST00000524775 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
CSTF3-205ENST00000524775 CUX1P39880 1505 aa19.53■□□□□ 0.72
CSTF3-205ENST00000524775 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
CSTF3-205ENST00000524775 SOGA1O94964 1423 aa19.42■□□□□ 0.7
CSTF3-205ENST00000524775 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
CSTF3-205ENST00000524775 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
CSTF3-205ENST00000524775 LOC105371045A0A1W2PR82 267 aa19.39■□□□□ 0.69
CSTF3-205ENST00000524775 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
CSTF3-205ENST00000524775 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
CSTF3-205ENST00000524775 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
CSTF3-205ENST00000524775 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CSTF3-205ENST00000524775 EEA1Q15075 1411 aa19.34■□□□□ 0.69
CSTF3-205ENST00000524775 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
CSTF3-205ENST00000524775 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
CSTF3-205ENST00000524775 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.67
CSTF3-205ENST00000524775 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
CSTF3-205ENST00000524775 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
CSTF3-205ENST00000524775 KIF21BO75037 1637 aa19.18■□□□□ 0.66
CSTF3-205ENST00000524775 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
CSTF3-205ENST00000524775 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
CSTF3-205ENST00000524775 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
CSTF3-205ENST00000524775 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
CSTF3-205ENST00000524775 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
CSTF3-205ENST00000524775 CUX2O14529 1486 aa19.1■□□□□ 0.65
CSTF3-205ENST00000524775 WDR62O43379 1518 aa19.1■□□□□ 0.65
CSTF3-205ENST00000524775 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
CSTF3-205ENST00000524775 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
CSTF3-205ENST00000524775 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
CSTF3-205ENST00000524775 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
CSTF3-205ENST00000524775 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
CSTF3-205ENST00000524775 IGF1RP08069 1367 aa19.04■□□□□ 0.64
CSTF3-205ENST00000524775 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
CSTF3-205ENST00000524775 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
CSTF3-205ENST00000524775 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
CSTF3-205ENST00000524775 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.63
CSTF3-205ENST00000524775 ERCC6Q03468 1493 aa19■□□□□ 0.63
CSTF3-205ENST00000524775 CUL7Q14999 1698 aa18.91■□□□□ 0.62
CSTF3-205ENST00000524775 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
CSTF3-205ENST00000524775 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
CSTF3-205ENST00000524775 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
CSTF3-205ENST00000524775 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
CSTF3-205ENST00000524775 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
CSTF3-205ENST00000524775 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
CSTF3-205ENST00000524775 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
CSTF3-205ENST00000524775 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
CSTF3-205ENST00000524775 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
CSTF3-205ENST00000524775 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.6
CSTF3-205ENST00000524775 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
CSTF3-205ENST00000524775 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
CSTF3-205ENST00000524775 CLIP1P30622 1438 aa18.74■□□□□ 0.59
CSTF3-205ENST00000524775 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
CSTF3-205ENST00000524775 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
CSTF3-205ENST00000524775 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
CSTF3-205ENST00000524775 ARHGAP35Q9NRY4 1499 aa18.64■□□□□ 0.57
CSTF3-205ENST00000524775 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
CSTF3-205ENST00000524775 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
CSTF3-205ENST00000524775 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms