RNA–Protein interactions for RNA: ENST00000540232.5

TAF1D-221, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, humanhuman

TSL 3

Gene TAF1D, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1D-221ENST00000540232 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
TAF1D-221ENST00000540232 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
TAF1D-221ENST00000540232 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
TAF1D-221ENST00000540232 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
TAF1D-221ENST00000540232 FOXD1Q16676 465 aa18.27■□□□□ 0.52
TAF1D-221ENST00000540232 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
TAF1D-221ENST00000540232 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
TAF1D-221ENST00000540232 ADRA2BP18089 450 aa17.35■□□□□ 0.37
TAF1D-221ENST00000540232 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
TAF1D-221ENST00000540232 MSH5O43196 834 aa16.95■□□□□ 0.3
TAF1D-221ENST00000540232 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
TAF1D-221ENST00000540232 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
TAF1D-221ENST00000540232 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
TAF1D-221ENST00000540232 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
TAF1D-221ENST00000540232 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
TAF1D-221ENST00000540232 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
TAF1D-221ENST00000540232 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
TAF1D-221ENST00000540232 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
TAF1D-221ENST00000540232 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
TAF1D-221ENST00000540232 KCNA4P22459 653 aa15.25■□□□□ 0.03
TAF1D-221ENST00000540232 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
TAF1D-221ENST00000540232 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
TAF1D-221ENST00000540232 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
TAF1D-221ENST00000540232 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
TAF1D-221ENST00000540232 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
TAF1D-221ENST00000540232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.091e-14■■□□□ 12
TAF1D-221ENST00000540232 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
TAF1D-221ENST00000540232 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
TAF1D-221ENST00000540232 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
TAF1D-221ENST00000540232 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
TAF1D-221ENST00000540232 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
TAF1D-221ENST00000540232 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
TAF1D-221ENST00000540232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
TAF1D-221ENST00000540232 ZBTB22O15209 634 aa14.03□□□□□ -0.16
TAF1D-221ENST00000540232 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
TAF1D-221ENST00000540232 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
TAF1D-221ENST00000540232 APLP2Q06481 763 aa13.94□□□□□ -0.18
TAF1D-221ENST00000540232 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
TAF1D-221ENST00000540232 CAPN15O75808 1086 aa13.86□□□□□ -0.19
TAF1D-221ENST00000540232 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
TAF1D-221ENST00000540232 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
TAF1D-221ENST00000540232 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
TAF1D-221ENST00000540232 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
TAF1D-221ENST00000540232 DSG3P32926 999 aa13.72□□□□□ -0.21
TAF1D-221ENST00000540232 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
TAF1D-221ENST00000540232 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
TAF1D-221ENST00000540232 ABCB7O75027 752 aa13.56□□□□□ -0.24
TAF1D-221ENST00000540232 POLA2Q14181 598 aa13.48□□□□□ -0.25
TAF1D-221ENST00000540232 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
TAF1D-221ENST00000540232 FBLN2P98095 1184 aa13.1□□□□□ -0.31
TAF1D-221ENST00000540232 POTEHQ6S545 545 aa13.1□□□□□ -0.31
TAF1D-221ENST00000540232 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
TAF1D-221ENST00000540232 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
TAF1D-221ENST00000540232 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
TAF1D-221ENST00000540232 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
TAF1D-221ENST00000540232 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
TAF1D-221ENST00000540232 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
TAF1D-221ENST00000540232 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
TAF1D-221ENST00000540232 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
TAF1D-221ENST00000540232 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
TAF1D-221ENST00000540232 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
TAF1D-221ENST00000540232 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
TAF1D-221ENST00000540232 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
TAF1D-221ENST00000540232 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
TAF1D-221ENST00000540232 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
TAF1D-221ENST00000540232 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
TAF1D-221ENST00000540232 PROM2Q8N271 834 aa12.48□□□□□ -0.41
TAF1D-221ENST00000540232 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
TAF1D-221ENST00000540232 FKBP8Q14318 412 aa12.43□□□□□ -0.42
TAF1D-221ENST00000540232 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
TAF1D-221ENST00000540232 PIP4P2Q8N4L2 257 aa12.41□□□□□ -0.42
TAF1D-221ENST00000540232 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
TAF1D-221ENST00000540232 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
TAF1D-221ENST00000540232 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
TAF1D-221ENST00000540232 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
TAF1D-221ENST00000540232 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
TAF1D-221ENST00000540232 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
TAF1D-221ENST00000540232 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
TAF1D-221ENST00000540232 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
TAF1D-221ENST00000540232 HAX1O00165 279 aa12.04□□□□□ -0.48
TAF1D-221ENST00000540232 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
TAF1D-221ENST00000540232 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
TAF1D-221ENST00000540232 MIER1Q8N108 512 aa12□□□□□ -0.49
TAF1D-221ENST00000540232 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
TAF1D-221ENST00000540232 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
TAF1D-221ENST00000540232 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
TAF1D-221ENST00000540232 EVX2Q03828 476 aa11.94□□□□□ -0.5
TAF1D-221ENST00000540232 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
TAF1D-221ENST00000540232 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
TAF1D-221ENST00000540232 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
TAF1D-221ENST00000540232 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
TAF1D-221ENST00000540232 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
TAF1D-221ENST00000540232 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
TAF1D-221ENST00000540232 NUBP1P53384 320 aa11.76□□□□□ -0.53
TAF1D-221ENST00000540232 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
TAF1D-221ENST00000540232 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
TAF1D-221ENST00000540232 CLCN6P51797 869 aa11.72□□□□□ -0.53
TAF1D-221ENST00000540232 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
TAF1D-221ENST00000540232 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
TAF1D-221ENST00000540232 GABBR2O75899 941 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms