Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBE2AP49459 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.95□□□□□ -0.34
UBE2AP49459 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBE2AP49459 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC12.94□□□□□ -0.34
UBE2AP49459 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UBE2AP49459 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBE2AP49459 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2AP49459 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 AC008175.2-201ENST00000612840 297 ntBASIC12.94□□□□□ -0.34
UBE2AP49459 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UBE2AP49459 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2AP49459 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2AP49459 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
UBE2AP49459 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UBE2AP49459 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
UBE2AP49459 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.93□□□□□ -0.34
UBE2AP49459 AC120498.10-201ENST00000621827 505 ntBASIC12.93□□□□□ -0.34
UBE2AP49459 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.93□□□□□ -0.34
UBE2AP49459 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBE2AP49459 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.92□□□□□ -0.34
UBE2AP49459 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2AP49459 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 RNF146-206ENST00000480444 843 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2AP49459 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UBE2AP49459 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBE2AP49459 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2AP49459 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.92□□□□□ -0.34
UBE2AP49459 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2AP49459 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UBE2AP49459 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms