Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB11Q9Y5F2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB11Q9Y5F2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDHB11Q9Y5F2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHB11Q9Y5F2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB11Q9Y5F2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 AL512625.2-201ENST00000417533 625 ntBASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 AC008687.6-201ENST00000596318 630 ntBASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHB11Q9Y5F2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 AL049796.1-201ENST00000565336 1766 ntBASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB11Q9Y5F2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 AL162412.1-201ENST00000567129 965 ntBASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 AC092118.2-201ENST00000613495 667 ntBASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB11Q9Y5F2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 AL591742.1-201ENST00000604433 565 ntBASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 AP006294.2-201ENST00000641667 209 ntBASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB11Q9Y5F2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms