Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPL13AP40429 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.15□□□□□ -0.14
RPL13AP40429 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RPL13AP40429 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RPL13AP40429 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RPL13AP40429 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RPL13AP40429 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RPL13AP40429 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.15□□□□□ -0.14
RPL13AP40429 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.15□□□□□ -0.14
RPL13AP40429 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RPL13AP40429 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 AC018445.3-201ENST00000624177 1945 ntBASIC14.15□□□□□ -0.14
RPL13AP40429 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RPL13AP40429 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.15□□□□□ -0.14
RPL13AP40429 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL13AP40429 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
RPL13AP40429 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
RPL13AP40429 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.14□□□□□ -0.15
RPL13AP40429 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RPL13AP40429 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RPL13AP40429 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL13AP40429 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RPL13AP40429 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
RPL13AP40429 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 AL031848.2-201ENST00000607670 837 ntBASIC14.14□□□□□ -0.15
RPL13AP40429 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL13AP40429 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RPL13AP40429 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RPL13AP40429 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL13AP40429 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RPL13AP40429 AL592295.1-201ENST00000400984 884 ntBASIC14.13□□□□□ -0.15
RPL13AP40429 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RPL13AP40429 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL13AP40429 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL13AP40429 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL13AP40429 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.12□□□□□ -0.15
RPL13AP40429 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RPL13AP40429 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.12□□□□□ -0.15
RPL13AP40429 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.12□□□□□ -0.15
RPL13AP40429 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.12□□□□□ -0.15
RPL13AP40429 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
RPL13AP40429 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 GABARAPL3-202ENST00000624044 1851 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms