Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 MAPK10-325ENST00000641537 2623 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TMOD2-202ENST00000435126 1490 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL023280.1-201ENST00000414840 1423 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 LINC01514-201ENST00000434189 1338 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC026765.2-201ENST00000551875 1330 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 HIGD1B-201ENST00000253410 635 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 RN7SKP87-201ENST00000364096 301 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL606490.5-201ENST00000413071 760 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 DUTP8-201ENST00000418412 489 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 UGT1A13P-201ENST00000424780 762 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 SMYD3-IT1-201ENST00000426929 361 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 C20orf173-204ENST00000444723 1059 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL445183.1-201ENST00000447867 467 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC073288.2-201ENST00000468232 664 ntTSL 3 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TPM3P9-202ENST00000492121 745 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC233724.11-201ENST00000508480 404 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TRIQK-220ENST00000524037 865 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC078927.1-201ENST00000539652 984 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 PHBP19-201ENST00000547512 754 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AC253536.6-201ENST00000609736 663 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 LARS-216ENST00000618084 720 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 AL353763.2-201ENST00000623489 1903 ntBASIC8.4□□□□□ -1.06
SNX18Q96RF0 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
SNX18Q96RF0 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
SNX18Q96RF0 PANX3-201ENST00000284288 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 FBXO47-201ENST00000378079 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 ZNF232-208ENST00000575898 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNX18Q96RF0 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
SNX18Q96RF0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.4□□□□□ -1.07
SNX18Q96RF0 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC098657.2-201ENST00000567886 1976 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 PDCD10-208ENST00000473645 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 ABCF2P1-201ENST00000465687 1867 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 OR14K1-201ENST00000283225 945 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 CCDC58-201ENST00000291458 720 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 ITGB1BP2-201ENST00000373829 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 U3.18-201ENST00000390880 216 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms