RNA–Protein interactions for RNA: ENST00000390880.2

U3.18-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.18-201ENST00000390880 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
U3.18-201ENST00000390880 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
U3.18-201ENST00000390880 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
U3.18-201ENST00000390880 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
U3.18-201ENST00000390880 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
U3.18-201ENST00000390880 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
U3.18-201ENST00000390880 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
U3.18-201ENST00000390880 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
U3.18-201ENST00000390880 HRCP23327 699 aa14.3□□□□□ -0.12
U3.18-201ENST00000390880 ABCC9O60706 1549 aa14.19□□□□□ -0.14
U3.18-201ENST00000390880 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
U3.18-201ENST00000390880 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
U3.18-201ENST00000390880 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
U3.18-201ENST00000390880 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
U3.18-201ENST00000390880 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
U3.18-201ENST00000390880 NACADO15069 1562 aa13.87□□□□□ -0.19
U3.18-201ENST00000390880 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
U3.18-201ENST00000390880 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
U3.18-201ENST00000390880 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
U3.18-201ENST00000390880 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
U3.18-201ENST00000390880 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
U3.18-201ENST00000390880 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
U3.18-201ENST00000390880 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
U3.18-201ENST00000390880 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
U3.18-201ENST00000390880 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
U3.18-201ENST00000390880 WIZO95785 1651 aa13.52□□□□□ -0.25
U3.18-201ENST00000390880 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
U3.18-201ENST00000390880 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
U3.18-201ENST00000390880 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
U3.18-201ENST00000390880 EEA1Q15075 1411 aa13.42□□□□□ -0.26
U3.18-201ENST00000390880 SMARCA4P51532 1647 aa13.4□□□□□ -0.26
U3.18-201ENST00000390880 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
U3.18-201ENST00000390880 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
U3.18-201ENST00000390880 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
U3.18-201ENST00000390880 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
U3.18-201ENST00000390880 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
U3.18-201ENST00000390880 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
U3.18-201ENST00000390880 CEP162Q5TB80 1403 aa13.23□□□□□ -0.29
U3.18-201ENST00000390880 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
U3.18-201ENST00000390880 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
U3.18-201ENST00000390880 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
U3.18-201ENST00000390880 KIF21BO75037 1637 aa13.17□□□□□ -0.3
U3.18-201ENST00000390880 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
U3.18-201ENST00000390880 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
U3.18-201ENST00000390880 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
U3.18-201ENST00000390880 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
U3.18-201ENST00000390880 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
U3.18-201ENST00000390880 SOGA1O94964 1423 aa13.11□□□□□ -0.31
U3.18-201ENST00000390880 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
U3.18-201ENST00000390880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
U3.18-201ENST00000390880 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
U3.18-201ENST00000390880 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
U3.18-201ENST00000390880 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
U3.18-201ENST00000390880 SYNJ1O43426 1573 aa13□□□□□ -0.33
U3.18-201ENST00000390880 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
U3.18-201ENST00000390880 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
U3.18-201ENST00000390880 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
U3.18-201ENST00000390880 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
U3.18-201ENST00000390880 CLIP1P30622 1438 aa12.97□□□□□ -0.33
U3.18-201ENST00000390880 MYT1Q01538 1121 aa12.97□□□□□ -0.33
U3.18-201ENST00000390880 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.34
U3.18-201ENST00000390880 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
U3.18-201ENST00000390880 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
U3.18-201ENST00000390880 CLSPNQ9HAW4 1339 aa12.94□□□□□ -0.34
U3.18-201ENST00000390880 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
U3.18-201ENST00000390880 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
U3.18-201ENST00000390880 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
U3.18-201ENST00000390880 APLP2Q06481 763 aa12.86□□□□□ -0.35
U3.18-201ENST00000390880 HMGXB3Q12766 1538 aa12.84□□□□□ -0.35
U3.18-201ENST00000390880 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
U3.18-201ENST00000390880 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
U3.18-201ENST00000390880 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
U3.18-201ENST00000390880 CUX2O14529 1486 aa12.78□□□□□ -0.36
U3.18-201ENST00000390880 NCAPD3P42695 1498 aa12.77□□□□□ -0.37
U3.18-201ENST00000390880 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
U3.18-201ENST00000390880 RRBP1Q9P2E9 1410 aaKnown RBP12.75□□□□□ -0.37
U3.18-201ENST00000390880 ARAP1Q96P48 1450 aa12.74□□□□□ -0.37
U3.18-201ENST00000390880 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
U3.18-201ENST00000390880 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
U3.18-201ENST00000390880 MAP3K1Q13233 1512 aa12.73□□□□□ -0.37
U3.18-201ENST00000390880 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
U3.18-201ENST00000390880 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
U3.18-201ENST00000390880 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
U3.18-201ENST00000390880 CUX1P39880 1505 aa12.67□□□□□ -0.38
U3.18-201ENST00000390880 CFTRP13569 1480 aa12.67□□□□□ -0.38
U3.18-201ENST00000390880 MIER1Q8N108 512 aa12.66□□□□□ -0.38
U3.18-201ENST00000390880 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
U3.18-201ENST00000390880 ARHGAP35Q9NRY4 1499 aa12.6□□□□□ -0.39
U3.18-201ENST00000390880 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
U3.18-201ENST00000390880 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
U3.18-201ENST00000390880 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
U3.18-201ENST00000390880 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
U3.18-201ENST00000390880 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
U3.18-201ENST00000390880 KANK4Q5T7N3 995 aaPredicted RBP12.52□□□□□ -0.41
U3.18-201ENST00000390880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.51□□□□□ -0.41
U3.18-201ENST00000390880 EFCAB5A4FU69 1503 aa12.49□□□□□ -0.41
U3.18-201ENST00000390880 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
U3.18-201ENST00000390880 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
U3.18-201ENST00000390880 SETD5Q9C0A6 1442 aa12.48□□□□□ -0.41
U3.18-201ENST00000390880 IGF1RP08069 1367 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms