RNA–Protein interactions for RNA: ENST00000332836.6

NLRP9-201, Transcript of NLR family pyrin domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP9, Length 3,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP9-201ENST00000332836 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
NLRP9-201ENST00000332836 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
NLRP9-201ENST00000332836 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
NLRP9-201ENST00000332836 MYT1Q01538 1121 aa14.28□□□□□ -0.12
NLRP9-201ENST00000332836 HRCP23327 699 aa14.05□□□□□ -0.16
NLRP9-201ENST00000332836 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
NLRP9-201ENST00000332836 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
NLRP9-201ENST00000332836 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
NLRP9-201ENST00000332836 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.22
NLRP9-201ENST00000332836 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
NLRP9-201ENST00000332836 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
NLRP9-201ENST00000332836 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
NLRP9-201ENST00000332836 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
NLRP9-201ENST00000332836 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
NLRP9-201ENST00000332836 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
NLRP9-201ENST00000332836 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
NLRP9-201ENST00000332836 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
NLRP9-201ENST00000332836 NACADO15069 1562 aa13.24□□□□□ -0.29
NLRP9-201ENST00000332836 ABCC9O60706 1549 aa13.23□□□□□ -0.29
NLRP9-201ENST00000332836 APLP2Q06481 763 aa13.18□□□□□ -0.3
NLRP9-201ENST00000332836 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
NLRP9-201ENST00000332836 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
NLRP9-201ENST00000332836 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
NLRP9-201ENST00000332836 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
NLRP9-201ENST00000332836 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
NLRP9-201ENST00000332836 GTF3C3Q9Y5Q9 886 aa13.03□□□□□ -0.32
NLRP9-201ENST00000332836 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
NLRP9-201ENST00000332836 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
NLRP9-201ENST00000332836 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
NLRP9-201ENST00000332836 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
NLRP9-201ENST00000332836 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
NLRP9-201ENST00000332836 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
NLRP9-201ENST00000332836 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
NLRP9-201ENST00000332836 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
NLRP9-201ENST00000332836 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
NLRP9-201ENST00000332836 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
NLRP9-201ENST00000332836 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
NLRP9-201ENST00000332836 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
NLRP9-201ENST00000332836 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
NLRP9-201ENST00000332836 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
NLRP9-201ENST00000332836 WIZO95785 1651 aa12.6□□□□□ -0.39
NLRP9-201ENST00000332836 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.4
NLRP9-201ENST00000332836 PEG3Q9GZU2 1588 aa12.5□□□□□ -0.41
NLRP9-201ENST00000332836 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
NLRP9-201ENST00000332836 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
NLRP9-201ENST00000332836 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
NLRP9-201ENST00000332836 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
NLRP9-201ENST00000332836 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
NLRP9-201ENST00000332836 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
NLRP9-201ENST00000332836 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
NLRP9-201ENST00000332836 UBE2Q2Q8WVN8 375 aa12.36□□□□□ -0.43
NLRP9-201ENST00000332836 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
NLRP9-201ENST00000332836 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
NLRP9-201ENST00000332836 EIF5BO60841 1220 aaKnown RBP12.3□□□□□ -0.44
NLRP9-201ENST00000332836 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
NLRP9-201ENST00000332836 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
NLRP9-201ENST00000332836 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
NLRP9-201ENST00000332836 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
NLRP9-201ENST00000332836 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
NLRP9-201ENST00000332836 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
NLRP9-201ENST00000332836 YTHDC1Q96MU7 727 aaKnown RBP12.23□□□□□ -0.45
NLRP9-201ENST00000332836 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
NLRP9-201ENST00000332836 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
NLRP9-201ENST00000332836 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
NLRP9-201ENST00000332836 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
NLRP9-201ENST00000332836 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
NLRP9-201ENST00000332836 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
NLRP9-201ENST00000332836 MSH5O43196 834 aa12.1□□□□□ -0.47
NLRP9-201ENST00000332836 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
NLRP9-201ENST00000332836 MIER1Q8N108 512 aa12.05□□□□□ -0.48
NLRP9-201ENST00000332836 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
NLRP9-201ENST00000332836 PRDM2Q13029 1718 aa12.02□□□□□ -0.48
NLRP9-201ENST00000332836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
NLRP9-201ENST00000332836 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
NLRP9-201ENST00000332836 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
NLRP9-201ENST00000332836 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
NLRP9-201ENST00000332836 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
NLRP9-201ENST00000332836 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
NLRP9-201ENST00000332836 CFTRP13569 1480 aa11.98□□□□□ -0.49
NLRP9-201ENST00000332836 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
NLRP9-201ENST00000332836 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.49
NLRP9-201ENST00000332836 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
NLRP9-201ENST00000332836 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
NLRP9-201ENST00000332836 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
NLRP9-201ENST00000332836 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
NLRP9-201ENST00000332836 EEA1Q15075 1411 aa11.93□□□□□ -0.5
NLRP9-201ENST00000332836 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
NLRP9-201ENST00000332836 SOGA1O94964 1423 aa11.89□□□□□ -0.51
NLRP9-201ENST00000332836 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
NLRP9-201ENST00000332836 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
NLRP9-201ENST00000332836 CUX1P39880 1505 aa11.85□□□□□ -0.51
NLRP9-201ENST00000332836 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
NLRP9-201ENST00000332836 IL27Q8NEV9 243 aa11.83□□□□□ -0.52
NLRP9-201ENST00000332836 KIF21BO75037 1637 aa11.81□□□□□ -0.52
NLRP9-201ENST00000332836 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.52
NLRP9-201ENST00000332836 BCANQ96GW7 911 aa11.76□□□□□ -0.53
NLRP9-201ENST00000332836 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
NLRP9-201ENST00000332836 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
NLRP9-201ENST00000332836 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
NLRP9-201ENST00000332836 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms