RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.29
TRIO-224ENST00000620511 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.86
TRIO-224ENST00000620511 ABCC9O60706 1549 aa19.74■□□□□ 0.75
TRIO-224ENST00000620511 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
TRIO-224ENST00000620511 NACADO15069 1562 aa19.11■□□□□ 0.65
TRIO-224ENST00000620511 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
TRIO-224ENST00000620511 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
TRIO-224ENST00000620511 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
TRIO-224ENST00000620511 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
TRIO-224ENST00000620511 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
TRIO-224ENST00000620511 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
TRIO-224ENST00000620511 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
TRIO-224ENST00000620511 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRIO-224ENST00000620511 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
TRIO-224ENST00000620511 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
TRIO-224ENST00000620511 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.47
TRIO-224ENST00000620511 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
TRIO-224ENST00000620511 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
TRIO-224ENST00000620511 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
TRIO-224ENST00000620511 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
TRIO-224ENST00000620511 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
TRIO-224ENST00000620511 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
TRIO-224ENST00000620511 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
TRIO-224ENST00000620511 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
TRIO-224ENST00000620511 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
TRIO-224ENST00000620511 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
TRIO-224ENST00000620511 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
TRIO-224ENST00000620511 SMARCA2P51531 1590 aa17.64■□□□□ 0.42
TRIO-224ENST00000620511 WIZO95785 1651 aa17.63■□□□□ 0.41
TRIO-224ENST00000620511 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
TRIO-224ENST00000620511 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
TRIO-224ENST00000620511 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
TRIO-224ENST00000620511 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
TRIO-224ENST00000620511 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
TRIO-224ENST00000620511 NESP48681 1621 aa17.19■□□□□ 0.34
TRIO-224ENST00000620511 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
TRIO-224ENST00000620511 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
TRIO-224ENST00000620511 CFTRP13569 1480 aa17.11■□□□□ 0.33
TRIO-224ENST00000620511 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
TRIO-224ENST00000620511 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
TRIO-224ENST00000620511 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
TRIO-224ENST00000620511 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
TRIO-224ENST00000620511 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
TRIO-224ENST00000620511 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
TRIO-224ENST00000620511 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
TRIO-224ENST00000620511 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
TRIO-224ENST00000620511 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
TRIO-224ENST00000620511 WDR62O43379 1518 aa16.77■□□□□ 0.28
TRIO-224ENST00000620511 TOPBP1Q92547 1522 aa16.71■□□□□ 0.26
TRIO-224ENST00000620511 CUX2O14529 1486 aa16.7■□□□□ 0.26
TRIO-224ENST00000620511 CUX1P39880 1505 aa16.7■□□□□ 0.26
TRIO-224ENST00000620511 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
TRIO-224ENST00000620511 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
TRIO-224ENST00000620511 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
TRIO-224ENST00000620511 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
TRIO-224ENST00000620511 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TRIO-224ENST00000620511 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
TRIO-224ENST00000620511 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
TRIO-224ENST00000620511 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
TRIO-224ENST00000620511 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
TRIO-224ENST00000620511 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
TRIO-224ENST00000620511 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
TRIO-224ENST00000620511 SOGA1O94964 1423 aa16.49■□□□□ 0.23
TRIO-224ENST00000620511 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
TRIO-224ENST00000620511 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
TRIO-224ENST00000620511 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
TRIO-224ENST00000620511 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
TRIO-224ENST00000620511 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.214e-6■■□□□ 13.9
TRIO-224ENST00000620511 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
TRIO-224ENST00000620511 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
TRIO-224ENST00000620511 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
TRIO-224ENST00000620511 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
TRIO-224ENST00000620511 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
TRIO-224ENST00000620511 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
TRIO-224ENST00000620511 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
TRIO-224ENST00000620511 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
TRIO-224ENST00000620511 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
TRIO-224ENST00000620511 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
TRIO-224ENST00000620511 IGF1RP08069 1367 aa16.2■□□□□ 0.18
TRIO-224ENST00000620511 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
TRIO-224ENST00000620511 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
TRIO-224ENST00000620511 CHD1O14646 1710 aa16.16■□□□□ 0.18
TRIO-224ENST00000620511 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
TRIO-224ENST00000620511 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
TRIO-224ENST00000620511 CUL7Q14999 1698 aa16.1■□□□□ 0.17
TRIO-224ENST00000620511 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
TRIO-224ENST00000620511 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
TRIO-224ENST00000620511 FBLN2P98095 1184 aa16.07■□□□□ 0.16
TRIO-224ENST00000620511 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
TRIO-224ENST00000620511 EEA1Q15075 1411 aa16.06■□□□□ 0.16
TRIO-224ENST00000620511 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
TRIO-224ENST00000620511 PRXQ9BXM0 1461 aa16.04■□□□□ 0.16
TRIO-224ENST00000620511 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
TRIO-224ENST00000620511 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
TRIO-224ENST00000620511 NUP160Q12769 1436 aa16.02■□□□□ 0.15
TRIO-224ENST00000620511 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
TRIO-224ENST00000620511 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
TRIO-224ENST00000620511 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
TRIO-224ENST00000620511 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
TRIO-224ENST00000620511 KIF21BO75037 1637 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms