RNA–Protein interactions for RNA: ENST00000326539.6

PRNT-201, Transcript of prion locus lncRNA, testis expressed, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNT, Length 2,333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNT-201ENST00000326539 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
PRNT-201ENST00000326539 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
PRNT-201ENST00000326539 ABCC9O60706 1549 aa17.45■□□□□ 0.38
PRNT-201ENST00000326539 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
PRNT-201ENST00000326539 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
PRNT-201ENST00000326539 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
PRNT-201ENST00000326539 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
PRNT-201ENST00000326539 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
PRNT-201ENST00000326539 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
PRNT-201ENST00000326539 MYT1Q01538 1121 aa16.25■□□□□ 0.19
PRNT-201ENST00000326539 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
PRNT-201ENST00000326539 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRNT-201ENST00000326539 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
PRNT-201ENST00000326539 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
PRNT-201ENST00000326539 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
PRNT-201ENST00000326539 APLP2Q06481 763 aa16■□□□□ 0.15
PRNT-201ENST00000326539 NACADO15069 1562 aa15.99■□□□□ 0.15
PRNT-201ENST00000326539 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
PRNT-201ENST00000326539 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
PRNT-201ENST00000326539 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
PRNT-201ENST00000326539 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
PRNT-201ENST00000326539 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
PRNT-201ENST00000326539 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
PRNT-201ENST00000326539 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.11
PRNT-201ENST00000326539 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
PRNT-201ENST00000326539 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
PRNT-201ENST00000326539 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
PRNT-201ENST00000326539 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
PRNT-201ENST00000326539 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
PRNT-201ENST00000326539 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
PRNT-201ENST00000326539 ARXQ96QS3 562 aa15.49■□□□□ 0.07
PRNT-201ENST00000326539 CUX2O14529 1486 aa15.47■□□□□ 0.07
PRNT-201ENST00000326539 KCNA4P22459 653 aa15.31■□□□□ 0.04
PRNT-201ENST00000326539 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
PRNT-201ENST00000326539 TIMELESSQ9UNS1 1208 aa15.26■□□□□ 0.03
PRNT-201ENST00000326539 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
PRNT-201ENST00000326539 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
PRNT-201ENST00000326539 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
PRNT-201ENST00000326539 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
PRNT-201ENST00000326539 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
PRNT-201ENST00000326539 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
PRNT-201ENST00000326539 TULP1O00294 542 aaPredicted RBP14.96□□□□□ -0.01
PRNT-201ENST00000326539 HOMEZQ8IX15 550 aa14.95□□□□□ -0.02
PRNT-201ENST00000326539 EIF5BO60841 1220 aaKnown RBP14.94□□□□□ -0.02
PRNT-201ENST00000326539 TAOK2Q9UL54 1235 aa14.93□□□□□ -0.02
PRNT-201ENST00000326539 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
PRNT-201ENST00000326539 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
PRNT-201ENST00000326539 THOC2Q8NI27 1593 aaKnown RBP14.79□□□□□ -0.04
PRNT-201ENST00000326539 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
PRNT-201ENST00000326539 NESP48681 1621 aa14.75□□□□□ -0.05
PRNT-201ENST00000326539 BCANQ96GW7 911 aa14.67□□□□□ -0.06
PRNT-201ENST00000326539 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
PRNT-201ENST00000326539 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
PRNT-201ENST00000326539 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
PRNT-201ENST00000326539 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
PRNT-201ENST00000326539 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
PRNT-201ENST00000326539 SMARCA2P51531 1590 aa14.58□□□□□ -0.07
PRNT-201ENST00000326539 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
PRNT-201ENST00000326539 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
PRNT-201ENST00000326539 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
PRNT-201ENST00000326539 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.09
PRNT-201ENST00000326539 KIF21AQ7Z4S6 1674 aa14.51□□□□□ -0.09
PRNT-201ENST00000326539 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
PRNT-201ENST00000326539 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
PRNT-201ENST00000326539 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
PRNT-201ENST00000326539 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
PRNT-201ENST00000326539 PLEKHG5O94827 1062 aa14.43□□□□□ -0.1
PRNT-201ENST00000326539 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
PRNT-201ENST00000326539 WDR62O43379 1518 aa14.42□□□□□ -0.1
PRNT-201ENST00000326539 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
PRNT-201ENST00000326539 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
PRNT-201ENST00000326539 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
PRNT-201ENST00000326539 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
PRNT-201ENST00000326539 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
PRNT-201ENST00000326539 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
PRNT-201ENST00000326539 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
PRNT-201ENST00000326539 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
PRNT-201ENST00000326539 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
PRNT-201ENST00000326539 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
PRNT-201ENST00000326539 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
PRNT-201ENST00000326539 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
PRNT-201ENST00000326539 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
PRNT-201ENST00000326539 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
PRNT-201ENST00000326539 TMEM132AQ24JP5 1023 aa14.16□□□□□ -0.14
PRNT-201ENST00000326539 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
PRNT-201ENST00000326539 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
PRNT-201ENST00000326539 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
PRNT-201ENST00000326539 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
PRNT-201ENST00000326539 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
PRNT-201ENST00000326539 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
PRNT-201ENST00000326539 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
PRNT-201ENST00000326539 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
PRNT-201ENST00000326539 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
PRNT-201ENST00000326539 IFT140Q96RY7 1462 aa13.96□□□□□ -0.17
PRNT-201ENST00000326539 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.18
PRNT-201ENST00000326539 CFTRP13569 1480 aa13.94□□□□□ -0.18
PRNT-201ENST00000326539 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
PRNT-201ENST00000326539 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
PRNT-201ENST00000326539 CHD1O14646 1710 aa13.88□□□□□ -0.19
PRNT-201ENST00000326539 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms