RNA–Protein interactions for RNA: ENST00000412112.3

LINC01965-201, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 3 BASIC

Gene LINC01965, Length 1,378 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-201ENST00000412112 AEBP2Q6ZN18 517 aaPredicted RBP32.85■■■□□ 2.85
LINC01965-201ENST00000412112 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
LINC01965-201ENST00000412112 SENP3Q9H4L4 574 aaPredicted RBP27.99■■■□□ 2.07
LINC01965-201ENST00000412112 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
LINC01965-201ENST00000412112 FOXD1Q16676 465 aa26.02■■□□□ 1.76
LINC01965-201ENST00000412112 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
LINC01965-201ENST00000412112 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
LINC01965-201ENST00000412112 ADRA2BP18089 450 aa24.53■■□□□ 1.52
LINC01965-201ENST00000412112 POTEDQ86YR6 584 aa24.5■■□□□ 1.51
LINC01965-201ENST00000412112 PIAS4Q8N2W9 510 aaPredicted RBP24.39■■□□□ 1.49
LINC01965-201ENST00000412112 MSH5O43196 834 aa24.24■■□□□ 1.47
LINC01965-201ENST00000412112 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
LINC01965-201ENST00000412112 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
LINC01965-201ENST00000412112 MAPK8IP2Q13387 824 aaPredicted RBP22.4■■□□□ 1.18
LINC01965-201ENST00000412112 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
LINC01965-201ENST00000412112 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
LINC01965-201ENST00000412112 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
LINC01965-201ENST00000412112 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
LINC01965-201ENST00000412112 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
LINC01965-201ENST00000412112 RNF216Q9NWF9 866 aaPredicted RBP21.5■■□□□ 1.03
LINC01965-201ENST00000412112 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
LINC01965-201ENST00000412112 ABCC9O60706 1549 aa21.29■■□□□ 1
LINC01965-201ENST00000412112 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
LINC01965-201ENST00000412112 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
LINC01965-201ENST00000412112 KCNA4P22459 653 aa21.11■□□□□ 0.97
LINC01965-201ENST00000412112 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
LINC01965-201ENST00000412112 RNF39Q9H2S5 420 aa20.72■□□□□ 0.91
LINC01965-201ENST00000412112 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
LINC01965-201ENST00000412112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.52■□□□□ 0.88
LINC01965-201ENST00000412112 C1QBPQ07021 282 aaKnown RBP20.43■□□□□ 0.86
LINC01965-201ENST00000412112 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
LINC01965-201ENST00000412112 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
LINC01965-201ENST00000412112 NACADO15069 1562 aa20.27■□□□□ 0.84
LINC01965-201ENST00000412112 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
LINC01965-201ENST00000412112 U3KPZ7 1027 aaPredicted RBP20.15■□□□□ 0.82
LINC01965-201ENST00000412112 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
LINC01965-201ENST00000412112 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
LINC01965-201ENST00000412112 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
LINC01965-201ENST00000412112 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
LINC01965-201ENST00000412112 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
LINC01965-201ENST00000412112 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
LINC01965-201ENST00000412112 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
LINC01965-201ENST00000412112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
LINC01965-201ENST00000412112 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
LINC01965-201ENST00000412112 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
LINC01965-201ENST00000412112 CAPN15O75808 1086 aa19.67■□□□□ 0.74
LINC01965-201ENST00000412112 APLP2Q06481 763 aa19.64■□□□□ 0.73
LINC01965-201ENST00000412112 MYCNP04198 464 aaPredicted RBP19.63■□□□□ 0.73
LINC01965-201ENST00000412112 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
LINC01965-201ENST00000412112 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
LINC01965-201ENST00000412112 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
LINC01965-201ENST00000412112 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
LINC01965-201ENST00000412112 DSG3P32926 999 aa19.5■□□□□ 0.71
LINC01965-201ENST00000412112 ZNF219Q9P2Y4 722 aaPredicted RBP19.46■□□□□ 0.71
LINC01965-201ENST00000412112 ZBTB22O15209 634 aa19.44■□□□□ 0.7
LINC01965-201ENST00000412112 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
LINC01965-201ENST00000412112 ABCB7O75027 752 aa19.24■□□□□ 0.67
LINC01965-201ENST00000412112 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
LINC01965-201ENST00000412112 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
LINC01965-201ENST00000412112 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
LINC01965-201ENST00000412112 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
LINC01965-201ENST00000412112 POLA2Q14181 598 aa19.01■□□□□ 0.63
LINC01965-201ENST00000412112 ATXN8OSP0DMR3 200 aa19■□□□□ 0.63
LINC01965-201ENST00000412112 POTEHQ6S545 545 aa18.97■□□□□ 0.63
LINC01965-201ENST00000412112 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
LINC01965-201ENST00000412112 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
LINC01965-201ENST00000412112 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
LINC01965-201ENST00000412112 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
LINC01965-201ENST00000412112 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
LINC01965-201ENST00000412112 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
LINC01965-201ENST00000412112 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
LINC01965-201ENST00000412112 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
LINC01965-201ENST00000412112 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
LINC01965-201ENST00000412112 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
LINC01965-201ENST00000412112 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
LINC01965-201ENST00000412112 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
LINC01965-201ENST00000412112 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
LINC01965-201ENST00000412112 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
LINC01965-201ENST00000412112 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
LINC01965-201ENST00000412112 FBLN2P98095 1184 aa18.36■□□□□ 0.53
LINC01965-201ENST00000412112 NESP48681 1621 aa18.33■□□□□ 0.52
LINC01965-201ENST00000412112 WIZO95785 1651 aa18.28■□□□□ 0.52
LINC01965-201ENST00000412112 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
LINC01965-201ENST00000412112 CUX2O14529 1486 aa18.28■□□□□ 0.52
LINC01965-201ENST00000412112 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
LINC01965-201ENST00000412112 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
LINC01965-201ENST00000412112 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
LINC01965-201ENST00000412112 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
LINC01965-201ENST00000412112 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
LINC01965-201ENST00000412112 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
LINC01965-201ENST00000412112 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
LINC01965-201ENST00000412112 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
LINC01965-201ENST00000412112 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
LINC01965-201ENST00000412112 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
LINC01965-201ENST00000412112 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
LINC01965-201ENST00000412112 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
LINC01965-201ENST00000412112 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
LINC01965-201ENST00000412112 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
LINC01965-201ENST00000412112 CFTRP13569 1480 aa17.99■□□□□ 0.47
LINC01965-201ENST00000412112 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms