RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
ERCC6-208ENST00000515869 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
ERCC6-208ENST00000515869 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
ERCC6-208ENST00000515869 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
ERCC6-208ENST00000515869 ABCC9O60706 1549 aa14.66□□□□□ -0.06
ERCC6-208ENST00000515869 HRCP23327 699 aa14.51□□□□□ -0.09
ERCC6-208ENST00000515869 CCDC180Q9P1Z9 1646 aa14.47□□□□□ -0.09
ERCC6-208ENST00000515869 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
ERCC6-208ENST00000515869 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
ERCC6-208ENST00000515869 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
ERCC6-208ENST00000515869 PPARGC1BQ86YN6 1023 aaKnown RBP14.33□□□□□ -0.12
ERCC6-208ENST00000515869 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
ERCC6-208ENST00000515869 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
ERCC6-208ENST00000515869 LOC105371045A0A1W2PR82 267 aa14.13□□□□□ -0.15
ERCC6-208ENST00000515869 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.16
ERCC6-208ENST00000515869 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
ERCC6-208ENST00000515869 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
ERCC6-208ENST00000515869 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
ERCC6-208ENST00000515869 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
ERCC6-208ENST00000515869 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
ERCC6-208ENST00000515869 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
ERCC6-208ENST00000515869 NACADO15069 1562 aa13.74□□□□□ -0.21
ERCC6-208ENST00000515869 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
ERCC6-208ENST00000515869 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
ERCC6-208ENST00000515869 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
ERCC6-208ENST00000515869 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
ERCC6-208ENST00000515869 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
ERCC6-208ENST00000515869 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
ERCC6-208ENST00000515869 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
ERCC6-208ENST00000515869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
ERCC6-208ENST00000515869 RSF1Q96T23 1441 aaPredicted RBP13.46□□□□□ -0.26
ERCC6-208ENST00000515869 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
ERCC6-208ENST00000515869 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
ERCC6-208ENST00000515869 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
ERCC6-208ENST00000515869 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
ERCC6-208ENST00000515869 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
ERCC6-208ENST00000515869 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
ERCC6-208ENST00000515869 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
ERCC6-208ENST00000515869 CENPBP07199 599 aaPredicted RBP13.28□□□□□ -0.28
ERCC6-208ENST00000515869 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
ERCC6-208ENST00000515869 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
ERCC6-208ENST00000515869 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
ERCC6-208ENST00000515869 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
ERCC6-208ENST00000515869 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
ERCC6-208ENST00000515869 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
ERCC6-208ENST00000515869 WIZO95785 1651 aa13.06□□□□□ -0.32
ERCC6-208ENST00000515869 MYT1Q01538 1121 aa13.05□□□□□ -0.32
ERCC6-208ENST00000515869 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
ERCC6-208ENST00000515869 ATP1B4Q9UN42 357 aaPredicted RBP13□□□□□ -0.33
ERCC6-208ENST00000515869 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
ERCC6-208ENST00000515869 MIER1Q8N108 512 aa12.98□□□□□ -0.33
ERCC6-208ENST00000515869 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
ERCC6-208ENST00000515869 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
ERCC6-208ENST00000515869 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
ERCC6-208ENST00000515869 SOGA1O94964 1423 aa12.93□□□□□ -0.34
ERCC6-208ENST00000515869 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
ERCC6-208ENST00000515869 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
ERCC6-208ENST00000515869 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
ERCC6-208ENST00000515869 APLP2Q06481 763 aa12.85□□□□□ -0.35
ERCC6-208ENST00000515869 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
ERCC6-208ENST00000515869 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
ERCC6-208ENST00000515869 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
ERCC6-208ENST00000515869 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
ERCC6-208ENST00000515869 ITGAEP38570 1179 aa12.79□□□□□ -0.36
ERCC6-208ENST00000515869 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
ERCC6-208ENST00000515869 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
ERCC6-208ENST00000515869 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
ERCC6-208ENST00000515869 EEA1Q15075 1411 aa12.74□□□□□ -0.37
ERCC6-208ENST00000515869 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
ERCC6-208ENST00000515869 ATAD2BQ9ULI0 1458 aa12.73□□□□□ -0.37
ERCC6-208ENST00000515869 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
ERCC6-208ENST00000515869 CLIP1P30622 1438 aa12.71□□□□□ -0.38
ERCC6-208ENST00000515869 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
ERCC6-208ENST00000515869 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
ERCC6-208ENST00000515869 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
ERCC6-208ENST00000515869 FBLN2P98095 1184 aa12.69□□□□□ -0.38
ERCC6-208ENST00000515869 ERCC6Q03468 1493 aa12.68□□□□□ -0.38
ERCC6-208ENST00000515869 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
ERCC6-208ENST00000515869 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
ERCC6-208ENST00000515869 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
ERCC6-208ENST00000515869 CUX2O14529 1486 aa12.59□□□□□ -0.39
ERCC6-208ENST00000515869 BCANQ96GW7 911 aa12.58□□□□□ -0.4
ERCC6-208ENST00000515869 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
ERCC6-208ENST00000515869 RAPGEF2Q9Y4G8 1499 aa12.56□□□□□ -0.4
ERCC6-208ENST00000515869 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
ERCC6-208ENST00000515869 NESP48681 1621 aa12.55□□□□□ -0.4
ERCC6-208ENST00000515869 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
ERCC6-208ENST00000515869 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
ERCC6-208ENST00000515869 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
ERCC6-208ENST00000515869 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
ERCC6-208ENST00000515869 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
ERCC6-208ENST00000515869 KIF21BO75037 1637 aa12.49□□□□□ -0.41
ERCC6-208ENST00000515869 ANP32EQ9BTT0 268 aa12.47□□□□□ -0.41
ERCC6-208ENST00000515869 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
ERCC6-208ENST00000515869 FKBP8Q14318 412 aa12.46□□□□□ -0.41
ERCC6-208ENST00000515869 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
ERCC6-208ENST00000515869 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
ERCC6-208ENST00000515869 FAM50AQ14320 339 aaKnown RBP12.43□□□□□ -0.42
ERCC6-208ENST00000515869 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
ERCC6-208ENST00000515869 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms