RNA–Protein interactions for RNA: ENST00000396065.2

GCNT3-201, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCNT3, Length 4,933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-201ENST00000396065 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
GCNT3-201ENST00000396065 MYT1Q01538 1121 aa14.25□□□□□ -0.13
GCNT3-201ENST00000396065 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
GCNT3-201ENST00000396065 CENPBP07199 599 aaPredicted RBP13.55□□□□□ -0.24
GCNT3-201ENST00000396065 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
GCNT3-201ENST00000396065 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
GCNT3-201ENST00000396065 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
GCNT3-201ENST00000396065 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
GCNT3-201ENST00000396065 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
GCNT3-201ENST00000396065 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
GCNT3-201ENST00000396065 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
GCNT3-201ENST00000396065 NEFLP07196 543 aa13.03□□□□□ -0.32
GCNT3-201ENST00000396065 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
GCNT3-201ENST00000396065 HRCP23327 699 aa12.95□□□□□ -0.34
GCNT3-201ENST00000396065 APLP2Q06481 763 aa12.75□□□□□ -0.37
GCNT3-201ENST00000396065 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
GCNT3-201ENST00000396065 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
GCNT3-201ENST00000396065 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.39
GCNT3-201ENST00000396065 PPARGC1BQ86YN6 1023 aaKnown RBP12.64□□□□□ -0.39
GCNT3-201ENST00000396065 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
GCNT3-201ENST00000396065 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
GCNT3-201ENST00000396065 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
GCNT3-201ENST00000396065 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.4
GCNT3-201ENST00000396065 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
GCNT3-201ENST00000396065 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
GCNT3-201ENST00000396065 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
GCNT3-201ENST00000396065 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
GCNT3-201ENST00000396065 BCANQ96GW7 911 aa12.33□□□□□ -0.44
GCNT3-201ENST00000396065 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
GCNT3-201ENST00000396065 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
GCNT3-201ENST00000396065 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
GCNT3-201ENST00000396065 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
GCNT3-201ENST00000396065 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
GCNT3-201ENST00000396065 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
GCNT3-201ENST00000396065 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
GCNT3-201ENST00000396065 NISCHQ9Y2I1 1504 aa12.1□□□□□ -0.47
GCNT3-201ENST00000396065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
GCNT3-201ENST00000396065 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
GCNT3-201ENST00000396065 ANP32EQ9BTT0 268 aa12.07□□□□□ -0.48
GCNT3-201ENST00000396065 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
GCNT3-201ENST00000396065 NEUROD1Q13562 356 aa12.02□□□□□ -0.49
GCNT3-201ENST00000396065 NBR1Q14596 966 aa12□□□□□ -0.49
GCNT3-201ENST00000396065 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
GCNT3-201ENST00000396065 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
GCNT3-201ENST00000396065 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
GCNT3-201ENST00000396065 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
GCNT3-201ENST00000396065 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.5
GCNT3-201ENST00000396065 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
GCNT3-201ENST00000396065 FKBP8Q14318 412 aa11.91□□□□□ -0.5
GCNT3-201ENST00000396065 ANP32BQ92688 251 aaKnown RBP11.9□□□□□ -0.5
GCNT3-201ENST00000396065 ITGAEP38570 1179 aa11.86□□□□□ -0.51
GCNT3-201ENST00000396065 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
GCNT3-201ENST00000396065 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
GCNT3-201ENST00000396065 ANP32CO43423 234 aa11.84□□□□□ -0.51
GCNT3-201ENST00000396065 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
GCNT3-201ENST00000396065 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
GCNT3-201ENST00000396065 ARXQ96QS3 562 aa11.75□□□□□ -0.53
GCNT3-201ENST00000396065 ERICH6BQ5W0A0 696 aa11.75□□□□□ -0.53
GCNT3-201ENST00000396065 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
GCNT3-201ENST00000396065 NEFMP07197 916 aa11.7□□□□□ -0.54
GCNT3-201ENST00000396065 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
GCNT3-201ENST00000396065 DEKP35659 375 aaKnown RBP11.65□□□□□ -0.54
GCNT3-201ENST00000396065 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
GCNT3-201ENST00000396065 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
GCNT3-201ENST00000396065 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
GCNT3-201ENST00000396065 HSP90AA1P07900 732 aaKnown RBP11.62□□□□□ -0.55
GCNT3-201ENST00000396065 CCDC136Q96JN2 1154 aa11.6□□□□□ -0.55
GCNT3-201ENST00000396065 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
GCNT3-201ENST00000396065 UPF2Q9HAU5 1272 aaKnown RBP11.6□□□□□ -0.55
GCNT3-201ENST00000396065 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
GCNT3-201ENST00000396065 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
GCNT3-201ENST00000396065 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
GCNT3-201ENST00000396065 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
GCNT3-201ENST00000396065 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
GCNT3-201ENST00000396065 MIER1Q8N108 512 aa11.54□□□□□ -0.56
GCNT3-201ENST00000396065 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
GCNT3-201ENST00000396065 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
GCNT3-201ENST00000396065 DDRGK1Q96HY6 314 aa11.51□□□□□ -0.57
GCNT3-201ENST00000396065 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
GCNT3-201ENST00000396065 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
GCNT3-201ENST00000396065 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
GCNT3-201ENST00000396065 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.58
GCNT3-201ENST00000396065 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
GCNT3-201ENST00000396065 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
GCNT3-201ENST00000396065 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
GCNT3-201ENST00000396065 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
GCNT3-201ENST00000396065 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
GCNT3-201ENST00000396065 BECN1Q14457 450 aa11.41□□□□□ -0.58
GCNT3-201ENST00000396065 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
GCNT3-201ENST00000396065 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.58
GCNT3-201ENST00000396065 PTMAP06454 111 aaKnown RBP11.4□□□□□ -0.59
GCNT3-201ENST00000396065 PNNQ9H307 717 aaKnown RBP11.37□□□□□ -0.59
GCNT3-201ENST00000396065 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
GCNT3-201ENST00000396065 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
GCNT3-201ENST00000396065 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
GCNT3-201ENST00000396065 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
GCNT3-201ENST00000396065 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
GCNT3-201ENST00000396065 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
GCNT3-201ENST00000396065 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
GCNT3-201ENST00000396065 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms