RNA–Protein interactions for RNA: ENST00000350763.8

TNC-202, Transcript of tenascin C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNC, Length 7,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-202ENST00000350763 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
TNC-202ENST00000350763 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
TNC-202ENST00000350763 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
TNC-202ENST00000350763 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
TNC-202ENST00000350763 SUPT5HO00267 1087 aaKnown RBP14.02□□□□□ -0.16
TNC-202ENST00000350763 APLP2Q06481 763 aa13.95□□□□□ -0.18
TNC-202ENST00000350763 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
TNC-202ENST00000350763 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
TNC-202ENST00000350763 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
TNC-202ENST00000350763 MYT1Q01538 1121 aa13.71□□□□□ -0.22
TNC-202ENST00000350763 NISCHQ9Y2I1 1504 aa13.68□□□□□ -0.22
TNC-202ENST00000350763 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
TNC-202ENST00000350763 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
TNC-202ENST00000350763 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
TNC-202ENST00000350763 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
TNC-202ENST00000350763 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
TNC-202ENST00000350763 NEFLP07196 543 aa13.33□□□□□ -0.27
TNC-202ENST00000350763 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
TNC-202ENST00000350763 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
TNC-202ENST00000350763 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
TNC-202ENST00000350763 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
TNC-202ENST00000350763 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
TNC-202ENST00000350763 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
TNC-202ENST00000350763 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
TNC-202ENST00000350763 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
TNC-202ENST00000350763 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
TNC-202ENST00000350763 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
TNC-202ENST00000350763 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
TNC-202ENST00000350763 PPARGC1BQ86YN6 1023 aaKnown RBP12.82□□□□□ -0.36
TNC-202ENST00000350763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
TNC-202ENST00000350763 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
TNC-202ENST00000350763 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
TNC-202ENST00000350763 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
TNC-202ENST00000350763 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
TNC-202ENST00000350763 ITGAEP38570 1179 aa12.7□□□□□ -0.38
TNC-202ENST00000350763 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
TNC-202ENST00000350763 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
TNC-202ENST00000350763 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
TNC-202ENST00000350763 HRCP23327 699 aa12.5□□□□□ -0.41
TNC-202ENST00000350763 NEFMP07197 916 aa12.43□□□□□ -0.42
TNC-202ENST00000350763 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
TNC-202ENST00000350763 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
TNC-202ENST00000350763 BCANQ96GW7 911 aa12.35□□□□□ -0.43
TNC-202ENST00000350763 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
TNC-202ENST00000350763 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
TNC-202ENST00000350763 ANP32CO43423 234 aa12.33□□□□□ -0.44
TNC-202ENST00000350763 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
TNC-202ENST00000350763 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
TNC-202ENST00000350763 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
TNC-202ENST00000350763 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
TNC-202ENST00000350763 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
TNC-202ENST00000350763 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.46
TNC-202ENST00000350763 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
TNC-202ENST00000350763 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
TNC-202ENST00000350763 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
TNC-202ENST00000350763 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
TNC-202ENST00000350763 ARXQ96QS3 562 aa12.15□□□□□ -0.46
TNC-202ENST00000350763 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
TNC-202ENST00000350763 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
TNC-202ENST00000350763 FBLN2P98095 1184 aa12.14□□□□□ -0.47
TNC-202ENST00000350763 A0A0G2JS52 829 aa12.13□□□□□ -0.47
TNC-202ENST00000350763 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
TNC-202ENST00000350763 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
TNC-202ENST00000350763 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
TNC-202ENST00000350763 ABCC9O60706 1549 aa12.08□□□□□ -0.48
TNC-202ENST00000350763 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
TNC-202ENST00000350763 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
TNC-202ENST00000350763 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.48
TNC-202ENST00000350763 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
TNC-202ENST00000350763 CDK11BP21127 795 aaKnown RBP12.01□□□□□ -0.49
TNC-202ENST00000350763 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
TNC-202ENST00000350763 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
TNC-202ENST00000350763 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
TNC-202ENST00000350763 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
TNC-202ENST00000350763 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
TNC-202ENST00000350763 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
TNC-202ENST00000350763 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
TNC-202ENST00000350763 ZNF777Q9ULD5 760 aaPredicted RBP11.9□□□□□ -0.5
TNC-202ENST00000350763 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
TNC-202ENST00000350763 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
TNC-202ENST00000350763 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
TNC-202ENST00000350763 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
TNC-202ENST00000350763 NBR1Q14596 966 aa11.86□□□□□ -0.51
TNC-202ENST00000350763 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
TNC-202ENST00000350763 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
TNC-202ENST00000350763 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNC-202ENST00000350763 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
TNC-202ENST00000350763 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
TNC-202ENST00000350763 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
TNC-202ENST00000350763 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
TNC-202ENST00000350763 NCLP19338 710 aaKnown RBP11.8□□□□□ -0.52
TNC-202ENST00000350763 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
TNC-202ENST00000350763 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNC-202ENST00000350763 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
TNC-202ENST00000350763 BECN1Q14457 450 aa11.76□□□□□ -0.53
TNC-202ENST00000350763 FKBP8Q14318 412 aa11.76□□□□□ -0.53
TNC-202ENST00000350763 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
TNC-202ENST00000350763 TSPY4P0CV99 314 aa11.74□□□□□ -0.53
TNC-202ENST00000350763 TSPY10P0CW01 314 aa11.74□□□□□ -0.53
TNC-202ENST00000350763 ZRSR1Q15695 479 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms